MInt: Learn Direct Interaction Networks

Learns direct microbe-microbe interaction networks using a Poisson multivariate-normal hierarchical model with an L1 penalized precision matrix. Optimization is carried out using an iterative conditional modes algorithm.

Package details

AuthorSurojit Biswas, Meredith McDonald, Derek S. Lundberg, Jeffery L. Dangl, Vladimir Jojic
MaintainerSurojit Biswas <[email protected]>
Package repositoryView on CRAN
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MInt documentation built on May 2, 2019, 7:24 a.m.