ML.MSBD: Maximum Likelihood Inference on Multi-State Trees

Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani, T. G. Vaughan and T. Stadler (2018) <doi:10.1098/rsif.2018.0512>.

Package details

AuthorJoelle Barido-Sottani [aut, cre]
MaintainerJoelle Barido-Sottani <>
Package repositoryView on CRAN
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ML.MSBD documentation built on April 17, 2021, 1:07 a.m.