API for Mangrove
Risk Prediction on Trees

Global functions
Mangrove Man page
Mangrove-package Man page
MangroveBetas Man page
MangroveContPreds Man page
MangroveExamples Man page
MangroveORs Man page
MangrovePed Man page
MangroveRiskPreds Man page
MangroveSample Man page
MangroveTree Man page
addNode Source code
addPed Man page Source code
addRoot Source code
applyBetas Man page Source code
applyORs Man page Source code
calcAlpha Source code
calcBeta Source code
calcBetas Man page Source code
calcLikelihoods Source code
calcORs Man page Source code
calcParams Source code
calcPost Source code
ccped Man page
contped Man page
exampleBetas Man page
exampleORs Man page
famped Man page
getCoupleLikelihood Source code
getData Source code
getLikelihood Source code
getMaxDepth Source code
getNNodes Source code
getNinds Source code
getOffspring Source code
getPrevs Man page Source code
getRoot Source code
getSingleLikelihood Source code
getTrans Source code
getVarExp Man page Source code
getVarExpSim Man page Source code
getVarExp_loci Source code
initialiseTree Man page Source code
mendT Man page
onLoad Source code
plot.MangroveBetas Man page Source code
plot.MangroveContPreds Man page Source code
plot.MangroveORs Man page Source code
plot.MangrovePed Man page Source code
plot.MangroveRiskPreds Man page Source code
plot.MangroveSample Man page Source code
plot.MangroveTree Man page Source code
plotNaivePrev Man page Source code
plotSampledPrev Man page Source code
print.MangroveBetas Man page Source code
print.MangroveContPreds Man page Source code
print.MangroveORs Man page Source code
print.MangrovePed Man page Source code
print.MangroveRiskPreds Man page Source code
print.MangroveSample Man page Source code
print.MangroveTree Man page Source code
printSummary Source code
printTree Source code
readBetas Man page Source code
readORs Man page Source code
readPed Man page Source code
sampleCases Source code
sampleVariant Source code
sampleVariants Source code
summary.MangroveBetas Man page Source code
summary.MangroveContPreds Man page Source code
summary.MangroveORs Man page Source code
summary.MangrovePed Man page Source code
summary.MangroveRiskPreds Man page Source code
summary.MangroveSample Man page Source code
summary.MangroveTree Man page Source code
Mangrove documentation built on May 29, 2017, 11:54 a.m.