mi_get_ID: Get ID data from the 'Biomart' database using 'attributes'.

In MantaID: A Machine-Learning Based Tool to Automate the Identification of Biological Database IDs

Get ID data from the Biomart database using attributes.

Description

Get ID data from the Biomart database using attributes.

Usage

mi_get_ID(
  attributes,
  biomart = "genes",
  dataset = "hsapiens_gene_ensembl",
  mirror = "asia"
)

Arguments

attributes	A dataframe.The information we want to retrieve.Use mi_get_ID_attr to hava try.
biomart	BioMart database name you want to connect to. Use biomaRt::listEnsembl to retrieve the possible database names.
dataset	Datasets of the selected BioMart database.
mirror	Specify an Ensembl mirror to connect to.

Value

A tibble dataframe.

MantaID documentation built on Sept. 11, 2024, 6 p.m.