Description Usage Arguments Value Author(s) Examples
This function read the output from Methpup into R
1 | getdata(filelist, n, gene)
|
filelist |
the directory where the output files are saved in |
gene |
the region that you are interested to look at the methylation profile |
n |
the number of CpG sites in the region that you specified in "gene". |
This function could yield a dataframe saying the read number detected in each methylation pattern in the given region in all samples under "filelist" directory.
Xin Yang xin.yang@cimr.cam.ac.uk
1 | foxp3<-getdata(system.file("extdata", package="Methplot"), 10, "foxp3")
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