convertToLongFormat: Reshaping microsimulation output into long format

In MicSim: Performing Continuous-Time Microsimulation

Reshaping microsimulation output into long format

Description

The function reshapes the output given by micSim or by micSimParallel into long format. In long format, the data comprises for each episode which an individual experiences one row.

Usage

convertToLongFormat(pop,migr=FALSE)

Arguments

pop	The data frame pop contains the whole synthetic population considered during simulation including all events generated. For each individidual pop contains as many rows as the individual performed transitions during simulation.
migr	A logical variable indicating whether the simulation model considers immigration. The default setting is "no immigration considered": migr=FALSE.

Details

convertToLongFormat uses information from the definition of the microsimulation model. In particular, it uses stateSpace, absTransitions, allTransitions, simHorizon, and optionally immigrPop. (For a description of these objects see micSim.) stateSpace, absTransitions, allTransitions, simHorizon, and immigrPop are globally defined, i.e., they are already part of the workspace. Thus, they do not have to be given to convertToLongFormat as extra input parameters.

Value

A data frame comprising the microsimulation output in long format.

- ID is the unique numerical person identifier of an individual.

- birthDate is the birth date of an individual.

- The variables Tstart and Tstop mark the start und the ending dates of episodes.

- statusEntry specifies whether the entry into an episode has been observed. Value "1" marks an observed entry and "0" marks a left truncated episode.

- statusExit specifies whether a transition between two states or right censoring completed an episode. Value "1" indicates a transition and "0" a censoring event.

- OD names the transition which completed an episode. Here, right censoring is marked by "cens".

- ns gives the number of episodes an individual has passed.

- Episode enumerates the episodes an individual has passed.

- The last columns of the data frame contain for each individual and episode the values of the state variables during that episode such as ‘sex’, ‘education’, etc.

- Birth and transition times are given as calendar dates in form of chron objects.

Author(s)

Sabine Zinn

Examples

# Run microsimulation before, e.g., the complex example described on the 
# help page of the function "micSim".
## Not run: 
pop <- micSim(initPop, immigrPop, transitionMatrix, absStates, initStates, initStatesProb, 
        maxAge, simHorizon, fertTr)
popLong <- convertToLongFormat(pop,migr=TRUE)

## End(Not run)

MicSim documentation built on Jan. 9, 2023, 5:05 p.m.