ecoli: Data set Ecoli: Protein Localization Sites
In MoTBFs: Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions
ecoli R Documentation
Data set Ecoli: Protein Localization Sites
Description
This data set contains information of Escherichia coli. It is a
bacterium of the genus Escherichia that is commonly found in the
lower intestine of warm-blooded organism.
Format
A data frame with 336 rows, 8 variables and the class.
Details
- Sequence Name
Accession number for the SWISS-PROT database.
- mcg
McGeoch's method for signal sequence recognition.
- gvh
Von Heijne's method for signal sequence recognition.
- lip
Von Heijne's Signal Peptidase II consensus sequence score. Binary attribute.
- chg
Presence of charge on N-terminus of predicted lipoproteins. Binary attribute.
- aac
Score of discriminant analysis of the amino acid content of outer membrane and periplasmic proteins.
- alm1
Score of the ALOM membrane spanning region prediction program.
- alm2
Score of ALOM program after excluding putative cleavable signal regions from the sequence.
- Class
Class variable. 8 possibles states.
Source
MoTBFs documentation built on April 18, 2022, 5:06 p.m.
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| ecoli | R Documentation |
Data set Ecoli: Protein Localization Sites
Description
This data set contains information of Escherichia coli. It is a bacterium of the genus Escherichia that is commonly found in the lower intestine of warm-blooded organism.
Format
A data frame with 336 rows, 8 variables and the class.
Details
- Sequence Name
Accession number for the SWISS-PROT database.
- mcg
McGeoch's method for signal sequence recognition.
- gvh
Von Heijne's method for signal sequence recognition.
- lip
Von Heijne's Signal Peptidase II consensus sequence score. Binary attribute.
- chg
Presence of charge on N-terminus of predicted lipoproteins. Binary attribute.
- aac
Score of discriminant analysis of the amino acid content of outer membrane and periplasmic proteins.
- alm1
Score of the ALOM membrane spanning region prediction program.
- alm2
Score of ALOM program after excluding putative cleavable signal regions from the sequence.
- Class
Class variable. 8 possibles states.
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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