Mondrian: A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events

The unique function of this package allows representing in a single graph the relative occurrence and co-occurrence of events measured in a sample. As examples, the package was applied to describe the occurrence and co-occurrence of different species of bacterial or viral symbionts infecting arthropods at the individual level. The graphics allows determining the prevalence of each symbiont and the patterns of multiple infections (i.e. how different symbionts share or not the same individual hosts). We named the package after the famous painter as the graphical output recalls Mondrian’s paintings.

Author
Aurélie Siberchicot, Delphine Charif, Gabriel Terraz and Fabrice Vavre
Date of publication
2016-03-04 17:34:11
Maintainer
Aurélie Siberchicot <aurelie.siberchicot@univ-lyon1.fr>
License
GPL (>= 2.0)
Version
1.0-0
URLs

View on CRAN

Man pages

endosymbiont_1pop
Multiple infection profiles in one population
endosymbiont_3pop
Multiple infection profiles in three populations
mondrian
Computes and displays the relative occurrence and...
Mondrian-package
A Simple Graphical Representation of the Relative Occurrence...

Files in this package

Mondrian
Mondrian/NAMESPACE
Mondrian/data
Mondrian/data/endosymbiont_1pop.rda
Mondrian/data/endosymbiont_3pop.rda
Mondrian/R
Mondrian/R/mondrian.R
Mondrian/MD5
Mondrian/DESCRIPTION
Mondrian/man
Mondrian/man/endosymbiont_3pop.Rd
Mondrian/man/endosymbiont_1pop.Rd
Mondrian/man/mondrian.Rd
Mondrian/man/Mondrian-package.Rd