NAIR: Network Analysis of Immune Repertoire

Pipelines for studying the adaptive immune repertoire of T cells and B cells via network analysis based on receptor sequence similarity. Relate clinical outcomes to immune repertoires based on their network properties, or to particular clusters and clones within a repertoire. Yang et al. (2023) <doi:10.3389/fimmu.2023.1181825>.

Package details

AuthorBrian Neal [aut, cre], Hai Yang [aut], Phi Long Le [aut], Li Zhang [cph, aut]
MaintainerBrian Neal <Brian.Neal@ucsf.edu>
LicenseGPL (>= 3)
Version1.0.2
URL https://mlizhangx.github.io/Network-Analysis-for-Repertoire-Sequencing-/ https://github.com/mlizhangx/Network-Analysis-for-Repertoire-Sequencing-
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("NAIR")

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NAIR documentation built on Sept. 27, 2023, 5:06 p.m.