NNTbiomarker: Calculate Design Parameters for Biomarker Validation Studies
Version 0.29.11

Helps a clinical trial team discuss the clinical goals of a well-defined biomarker with a diagnostic, staging, prognostic, or predictive purpose. From this discussion will come a statistical plan for a (non-randomized) validation trial. Both prospective and retrospective trials are supported. In a specific focused discussion, investigators should determine the range of "discomfort" for the NNT, number needed to treat. The meaning of the discomfort range, [NNTlower, NNTupper], is that within this range most physicians would feel discomfort either in treating or withholding treatment. A pair of NNT values bracketing that range, NNTpos and NNTneg, become the targets of the study's design. If the trial can demonstrate that a positive biomarker test yields an NNT less than NNTlower, and that a negative biomarker test yields an NNT less than NNTlower, then the biomarker may be useful for patients. A highlight of the package is visualization of a "contra-Bayes" theorem, which produces criteria for retrospective case-controls studies.

Package details

AuthorRoger Day
Date of publication2015-08-21 07:38:39
MaintainerRoger Day <day01@pitt.edu>
LicenseGPL-3
Version0.29.11
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("NNTbiomarker")

Try the NNTbiomarker package in your browser

Any scripts or data that you put into this service are public.

NNTbiomarker documentation built on May 29, 2017, 2:48 p.m.