An implementation of nonparametric combination of hypothesis tests. This package performs nonparametric combination (Pesarin and Salmaso 2010), a permutation-based procedure for jointly testing multiple hypotheses. The tests are conducted under the global "sharp" null hypothesis of no effects, and the component tests are combined on the metric of their p-values. A key feature of nonparametric combination is that it accounts for the dependence among tests under the null hypothesis. In addition to the "NPC" function, which performs nonparametric combination itself, the package also contains a number of helper functions, many of which calculate a test statistic given an input of data.

Author | Devin Caughey [aut, cre] |

Date of publication | 2016-03-28 16:51:57 |

Maintainer | Devin Caughey <devin.caughey@gmail.com> |

License | GPL-3 |

Version | 1.1.0 |

**DiffMeans:** Differences of Means Test Statistic

**DiffSumObs:** Difference in the Number of Non-Missing Responses

**DiffSumWithNA:** Sum Test Statistic for MCAR Data

**FWE:** FWE Adjustment Using Closed Testing or Stepdown MinP

**HarmonicWtdMean:** Block-Specific Mean Differences Weighted by Harmonic Mean...

**HoggAdapt:** Adaptive Choice of Rank-Based Test Statistic

**KS:** Kolmogorov-Smirnov Test Statistic

**LogRank:** Log-Rank Test Statistic

**MinimumCF:** Tippett's Minimum Combining Function

**NormalCF:** Liptak's Normal Combining Function

**NPC:** Nonparametric Combination of Dependent Hypothesis Tests

**open01:** Map P-Values to Open Unit Interval

**ProductCF:** Fisher's Product Combining Function

**RankSum:** Wilcoxon's Rank-Sum Statistic

**RankSumWithNA:** Rank-Sum Test Statistic for MCAR Data

**StudentsT:** Student's T Statistic

**StudentWilcoxon:** Studentized Wilcoxon Rank-Sum Statistic

**t2p:** Convert Test Statistics into P-Values

DiffMeans | Man page |

DiffSumObs | Man page |

DiffSumWithNA | Man page |

FWE | Man page |

HarmonicWtdMean | Man page |

HoggAdapt | Man page |

KS | Man page |

LogRank | Man page |

MinimumCF | Man page |

NormalCF | Man page |

NPC | Man page |

open01 | Man page |

ProductCF | Man page |

RankSum | Man page |

RankSumWithNA | Man page |

StudentsT | Man page |

StudentWilcoxon | Man page |

t2p | Man page |

NPC

NPC/NAMESPACE

NPC/NEWS.md

NPC/R

NPC/R/HoggAdapt.R
NPC/R/NormalCF.R
NPC/R/StudentWilcoxon.R
NPC/R/DiffSumObs.R
NPC/R/StudentsT.R
NPC/R/RankSum.R
NPC/R/KS.R
NPC/R/MinimumCF.R
NPC/R/DiffSumWithNA.R
NPC/R/t2p.R
NPC/R/NPC.R
NPC/R/RankSumWithNA.R
NPC/R/ProductCF.R
NPC/R/LogRank.R
NPC/R/DiffMeans.R
NPC/R/HarmonicWtdMean.R
NPC/R/open01.R
NPC/R/FWE.R
NPC/README.md

NPC/MD5

NPC/DESCRIPTION

NPC/man

NPC/man/ProductCF.Rd
NPC/man/HarmonicWtdMean.Rd
NPC/man/t2p.Rd
NPC/man/KS.Rd
NPC/man/RankSum.Rd
NPC/man/FWE.Rd
NPC/man/DiffSumWithNA.Rd
NPC/man/MinimumCF.Rd
NPC/man/LogRank.Rd
NPC/man/StudentWilcoxon.Rd
NPC/man/DiffSumObs.Rd
NPC/man/StudentsT.Rd
NPC/man/DiffMeans.Rd
NPC/man/RankSumWithNA.Rd
NPC/man/open01.Rd
NPC/man/NormalCF.Rd
NPC/man/HoggAdapt.Rd
NPC/man/NPC.Rd
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