NetComp: Network Generation and Comparison

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This package contains functions to carry out high throughput data analysis and to conduct data set comparisons. Similarity matrices from high throughput phenotypic data containing uninformative (e.g. wild type) or missing data can be calculated to report similarity of response. A suite of graph comparisons using an adjacency or correlation matrix format are included to facilitate quick network analysis.

Author
Shannon M. Bell <bell.shannonm@gmail.com>, Lyle D. Burgoon <burgoon.lyle@gmail.com>
Date of publication
2012-08-31 17:17:51
Maintainer
Shannon M. Bell <bell.shannonm@gmail.com>
License
GPL (>= 3)
Version
1.6

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Man pages

matrix_threshold
Remove values from Matrix based on threshold
netClass
Network from Class List
netDiff
Network Difference
netIntersect
Network Intersection
netUnion
Network Union
netVal
Network Validation
SimMeasure
Generation of Similarity Matrix from Sparse/ Low Information...

Files in this package

NetComp
NetComp/MD5
NetComp/src
NetComp/src/SimMeasure.c
NetComp/src/netVal.c
NetComp/src/matrix_threshold.c
NetComp/R
NetComp/R/SimMeasure.R
NetComp/R/netVal.R
NetComp/R/netUnion.R
NetComp/R/netIntersect.R
NetComp/R/netDiff.R
NetComp/R/netClass.R
NetComp/R/matrix_threshold.R
NetComp/NAMESPACE
NetComp/man
NetComp/man/SimMeasure.Rd
NetComp/man/netVal.Rd
NetComp/man/netUnion.Rd
NetComp/man/netIntersect.Rd
NetComp/man/netDiff.Rd
NetComp/man/netClass.Rd
NetComp/man/matrix_threshold.Rd
NetComp/DESCRIPTION