NetIndices: Estimating network indices, including trophic structure of foodwebs in R

Given a network (e.g. a food web), estimates several network indices. These include: Ascendency network indices, Direct and indirect dependencies, Effective measures, Environ network indices, General network indices, Pathway analysis, Network uncertainty indices and constraint efficiencies and the trophic level and omnivory indices of food webs.

Author
Karline Soetaert <karline.soetaert@nioz.nl>, Julius Kipyegon Kones <jkones@uonbi.ac.ke>, Dick van Oevelen <dick.vanoevelen@nioz.nl>
Date of publication
2014-12-26 11:07:15
Maintainer
Karline Soetaert <karline.soetaert@nioz.nl>
License
GPL (>= 2)
Version
1.4.4

View on CRAN

Man pages

AscInd
Ascendency network indices
Conesprings
Cone Spring ecosystem.
Dependency
Direct and indirect dependency analysis
EffInd
Effective measures (or roles) suite: weighted measures for...
EnvInd
Environ network indices
GenInd
General network indices.
NetIndices
Estimates network indices, including trophic structure of...
PathInd
Pathway analysis
Takapoto
Takapoto atoll planktonic food web
TrophInd
The trophic level and omnivory index
UncInd
Network uncertainty indices and constraint effiencies

Files in this package

NetIndices
NetIndices/inst
NetIndices/inst/CITATION
NetIndices/inst/EcologicalModelling
NetIndices/inst/EcologicalModelling/KonesPaper.r
NetIndices/inst/EcologicalModelling/Montecarlo.r
NetIndices/inst/doc
NetIndices/inst/doc/NetIndices.rnw
NetIndices/inst/doc/NetIndices.pdf
NetIndices/NAMESPACE
NetIndices/data
NetIndices/data/Conesprings.rda
NetIndices/data/Takapoto.rda
NetIndices/R
NetIndices/R/Dependency.R
NetIndices/R/EnvInd.R
NetIndices/R/UnInd.R
NetIndices/R/EffInd.R
NetIndices/R/AscInd.R
NetIndices/R/NetIndices.R
NetIndices/R/GenInd.R
NetIndices/R/PathInd.R
NetIndices/R/TrophInd.R
NetIndices/vignettes
NetIndices/vignettes/NetIndices.rnw
NetIndices/vignettes/NetIndices.bib
NetIndices/MD5
NetIndices/build
NetIndices/build/vignette.rds
NetIndices/DESCRIPTION
NetIndices/man
NetIndices/man/GenInd.Rd
NetIndices/man/Takapoto.Rd
NetIndices/man/Conesprings.Rd
NetIndices/man/TrophInd.Rd
NetIndices/man/AscInd.Rd
NetIndices/man/Dependency.Rd
NetIndices/man/UncInd.Rd
NetIndices/man/EnvInd.Rd
NetIndices/man/EffInd.Rd
NetIndices/man/NetIndices.Rd
NetIndices/man/PathInd.Rd