subnet: Subnetwork from a network
In NetworkSim: Network Comparison Based on Structural Equivalence and Graphlets

subnet generates a subnetwork from a network,which consists of specified nodes

1	subnet(net, nodes, impl = "auto", neighbors = F, delete = T)

`net`	The original net, which should be a graph object
`nodes`	Gene symbol, which should match the nodes in original net
`impl`	Character scalar, to choose between two implementation of the subgraph calculation. Details are implemented in subraph function of igraph package
`neighbors`	Logical scalar, whether to get the neighbors of input nodes
`delete`	Logical scalar, whether to remove the nodes which do not have any neighbors in the output network

subnet(net,nodes,impl="auto",neighbors=F,delete=T)

A new igraph graph object

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NOR2ADE.net <-subnet(net=databases.net,nodes = NOR2ADE.DEGs)

NetworkSim documentation built on May 2, 2019, 5:52 a.m.

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