Files in NeuroDecodeR
Decode Information from Neural Activity

MD5
README.md
NAMESPACE
DESCRIPTION
R/cl_poisson_naive_bayes.R R/create_binned_data.R R/rm_confusion_matrix.R R/fp_zscore.R R/test_valid_NDR_objects.R R/raster_data_functions.R R/log_and_save_decoding_results.R R/generic_functions.R R/ds_basic.R R/rm_main_results.R R/cl_svm.R R/get_num_label_repetitions.R R/fp_select_k_features.R R/NeuroDecodeR.R R/private_helper_functions.R R/ds_generalization.R R/ndr_container.R R/cv_standard.R R/cl_max_correlation.R inst/doc/generalization_tutorial.Rmd
inst/doc/data_formats.html
inst/doc/data_formats.R inst/doc/data_formats.Rmd
inst/doc/datasets.html
inst/doc/datasets.R inst/doc/generalization_tutorial.R
inst/doc/introduction_tutorial.html
inst/doc/NDR_object_specification.Rmd
inst/doc/generalization_tutorial.html
inst/doc/datasets.Rmd inst/doc/introduction_tutorial.Rmd
inst/doc/NDR_object_specification.html
inst/doc/NDR_object_specification.R inst/doc/introduction_tutorial.R
inst/extdata/ZD_400bins_400sampled_start100_end500.Rda
inst/extdata/ZD_150bins_50sampled.Rda
inst/extdata/ZD_500bins_500sampled.Rda
inst/extdata/Zhang_Desimone_7object_raster_data_small_mat/bp1001spk_02A_raster_data.mat
inst/extdata/Zhang_Desimone_7object_raster_data_small_mat/bp1001spk_03A_raster_data.mat
inst/extdata/Zhang_Desimone_7object_raster_data_small_mat/bp1001spk_04A_raster_data.mat
inst/extdata/Zhang_Desimone_7object_raster_data_small_mat/bp1001spk_01A_raster_data.mat
inst/extdata/Zhang_Desimone_7object_raster_data_small_rda/bp1001spk_02A_raster_data.rda
inst/extdata/Zhang_Desimone_7object_raster_data_small_rda/bp1001spk_04A_raster_data.rda
inst/extdata/Zhang_Desimone_7object_raster_data_small_rda/bp1001spk_03A_raster_data.rda
inst/extdata/Zhang_Desimone_7object_raster_data_small_rda/bp1001spk_01A_raster_data.rda
inst/extdata/Zhang_Desimone_7object_raster_data_small_rds/bp1001spk_02A_raster_data.rds
inst/extdata/Zhang_Desimone_7object_raster_data_small_rds/bp1001spk_01A_raster_data.rds
inst/extdata/Zhang_Desimone_7object_raster_data_small_rds/bp1001spk_04A_raster_data.rds
inst/extdata/Zhang_Desimone_7object_raster_data_small_rds/bp1001spk_03A_raster_data.rds
inst/extdata/Zhang_Desimone_7object_raster_data_small_csv/bp1001spk_02A_raster_data.csv
inst/extdata/Zhang_Desimone_7object_raster_data_small_csv/bp1001spk_01A_raster_data.csv
build/vignette.rds
tests/testthat.R tests/testthat/test-ndr_container.R tests/testthat/generate_data_to_test_NDR.R tests/testthat/test-classifiers.R
tests/testthat/fake_binned_data.Rda
tests/testthat/example_ZD_train_and_test_set.Rda
tests/testthat/cv_results_example.Rda
tests/testthat/test-feature_preprocessors.R
tests/testthat/fake_simultaneous_binned_data.Rda
tests/testthat/test-full_decoding.R tests/testthat/test-result_metrics.R tests/testthat/test-datasources.R
tests/testthat/example_DECODING_RESULTS.Rda
tests/testthat/test-bin_convert_data.R tests/testthat/test-log_save_results.R vignettes/generalization_tutorial.Rmd vignettes/data_formats.Rmd vignettes/NDR_object_specification.Rmd vignettes/datasets.Rmd vignettes/introduction_tutorial.Rmd man/fp_select_k_features.Rd man/get_parameters.cl_poisson_naive_bayes.Rd man/ds_basic.Rd man/convert_matlab_raster_data.Rd man/plot.rm_confusion_matrix.Rd man/log_check_results_already_exist.Rd man/run_decoding.Rd man/aggregate_CV_split_results.rm_main_results.Rd man/get_parameters.cv_standard.Rd man/aggregate_resample_run_results.rm_main_results.Rd man/log_save_results.Rd man/create_binned_data.Rd man/cl_poisson_naive_bayes.Rd man/plot_main_results.Rd man/plot.rm_main_results.Rd man/test_valid_ndr_object.Rd man/get_parameters.ds_generalization.Rd man/get_parameters.rm_confusion_matrix.Rd man/get_data.ds_basic.Rd man/get_data.ds_generalization.Rd man/get_data.Rd man/get_siteIDs_with_k_label_repetitions.Rd man/plot.label_repetition.Rd man/preprocess_data.fp_zscore.Rd man/cv_standard.Rd man/get_num_label_repetitions.Rd man/test_valid_raster_format.Rd man/get_predictions.Rd man/preprocess_data.fp_select_k_features.Rd man/get_parameters.Rd man/test_valid_binned_format.Rd man/aggregate_CV_split_results.Rd man/cl_max_correlation.Rd man/get_parameters.cl_max_correlation.Rd man/get_parameters.fp_zscore.Rd man/get_parameters.rm_main_results.Rd man/get_parameters.fp_select_k_features.Rd man/get_parameters.cl_svm.Rd man/get_predictions.cl_poisson_naive_bayes.Rd man/aggregate_resample_run_results.Rd man/log_load_results_from_result_name.Rd man/cl_svm.Rd man/read_raster_data.Rd man/rm_main_results.Rd man/NeuroDecodeR.Rd man/aggregate_CV_split_results.rm_confusion_matrix.Rd man/preprocess_data.Rd man/get_predictions.cl_max_correlation.Rd man/aggregate_resample_run_results.rm_confusion_matrix.Rd man/get_parameters.ds_basic.Rd man/plot.raster_data.Rd man/fp_zscore.Rd man/ds_generalization.Rd man/get_num_label_repetitions_each_site.Rd man/read_matlab_raster_data.Rd man/run_decoding.cv_standard.Rd man/get_predictions.cl_svm.Rd man/log_load_results_from_params.Rd man/rm_confusion_matrix.Rd
man/figures/README-line_plot-1.png
man/figures/README-TCD_plot-1.png
man/figures/README-pipe_example-1.png
NeuroDecodeR documentation built on May 29, 2024, 4:40 a.m.