OpenMx: Extended Structural Equation Modelling
Version 2.7.11

Facilitates treatment of statistical model specifications as things that can be generated and manipulated programmatically. Structural equation models may be specified with reticular action model matrices or paths, linear structural relations matrices or paths, or directly in matrix algebra. Fit functions include full information maximum likelihood, maximum likelihood, and weighted least squares. Example models include confirmatory factor, multiple group, mixture distribution, categorical threshold, modern test theory, differential equations, state space, and many others.

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AuthorSteven M. Boker [aut], Michael C. Neale [aut], Hermine H. Maes [aut], Michael J. Wilde [ctb], Michael Spiegel [aut], Timothy R. Brick [aut], Ryne Estabrook [aut], Timothy C. Bates [aut], Paras Mehta [ctb], Timo von Oertzen [ctb], Ross J. Gore [aut], Michael D. Hunter [aut], Daniel C. Hackett [ctb], Julian Karch [ctb], Andreas M. Brandmaier [ctb], Joshua N. Pritikin [aut, cre], Mahsa Zahery [aut], Robert M. Kirkpatrick [aut], Yang Wang [ctb], Charles Driver [ctb], Massachusetts Institute of Technology [cph], S. G. Johnson [cph], Association for Computing Machinery [cph], Dieter Kraft [cph], Stefan Wilhelm [cph], Manjunath B G [cph]
Date of publication2017-05-05 23:06:11 UTC
MaintainerJoshua N. Pritikin <jpritikin@pobox.com>
LicenseApache License (== 2.0)
Version2.7.11
URL http://openmx.ssri.psu.edu https://github.com/OpenMx/OpenMx
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("OpenMx")

Man pages

BaseCompute-class: BaseCompute
Bollen_data: Bollen Data on Industrialization and Political Democracy
cvectorize: Vectorize By Column
demoOneFactor_data: Demonstration data for a one factor model
demoTwoFactor_data: Demonstration data for a two factor model
diag2vec: Extract Diagonal of a Matrix
dzfData: DZ female data
dzmData: DZ Male data
dzoData: DZ opposite sex data
eigenvec: Eigenvector/Eigenvalue Decomposition
example1_data: Bivariate twin data example from Classic Mx Manual
example2_data: Bivariate twin data example from Classic Mx Manual
expm: Matrix exponential
factorExample1_data: Example Factor Analysis Data
factorScaleExample1_data: Example Factor Analysis Data for Scaling the Model
factorScaleExample2_data: Example Factor Analysis Data for Scaling the Model
genericFitDependencies-MxBaseFitFunction-method: Add dependencies
HS.ability.data: Holzinger and Swineford (1939) Ability data in 301 children...
imxAddDependency: Add a dependency
imxAutoOptionValue: imxAutoOptionValue
imxCheckMatrices: imxCheckMatrices
imxCheckVariables: imxCheckVariables
imxConDecMatrixSlots: Condense/decondense slots of an MxMatrix
imxConstraintRelations: imxConstraintRelations
imxConvertIdentifier: imxConvertIdentifier
imxConvertLabel: imxConvertLabel
imxConvertSubstitution: imxConvertSubstitution
imxCreateMatrix: Create a matrix
imxDataTypes: Valid types of data that can be contained by MxData
imxDefaultGetSlotDisplayNames: imxDefaultGetSlotDisplayNames
imxDeparse: Deparse for MxObjects
imxDependentModels: Are submodels dependence?
imxDetermineDefaultOptimizer: imxDetermineDefaultOptimizer
imxDiff: Set difference on regular types or S4 objects
imxDmvnorm: A C implementation of dmvnorm
imxEvalByName: imxEvalByName
imxExtractMethod: imxExtractMethod
imxExtractNames: imxExtractNames
imxExtractReferences: imxExtractReferences
imxExtractSlot: imxExtractSlot
imxFlattenModel: Remove heirarchical structure from model
imxFreezeModel: Freeze model
imxGenerateLabels: imxGenerateLabels
imxGenerateNamespace: imxGenerateNamespace
imxGenericModelBuilder: imxGenericModelBuilder
imxGenSwift: imxGenSwift
imxGentleResize: Resize an MxMatrix while preserving entries
imxGetSlotDisplayNames: imxGetSlotDisplayNames
imxHasConstraint: imxHasConstraint
imxHasDefinitionVariable: imxHasDefinitionVariable
imxHasNPSOL: imxHasNPSOL
imxHasOpenMP: imxHasOpenMP
imxIdentifier: imxIdentifier
imxIndependentModels: Are submodels independent?
imxInitModel: imxInitModel
imxIsDefinitionVariable: imxIsDefinitionVariable
imxIsPath: imxIsPath
imxJiggle: imxJiggle
imxLocateFunction: imxLocateFunction
imxLocateIndex: imxLocateIndex
imxLocateLabel: imxLocateLabel
imxLog: Test thread-safe output code
imxLookupSymbolTable: imxLookupSymbolTable
imxModelBuilder: imxModelBuilder
imxModelTypes: imxModelTypes
imxMpiWrap: imxMpiWrap
imxOriginalMx: imxOriginalMx
imxPPML: imxPPML
imxPPML.Test.Battery: imxPPML.Test.Battery
imxPPML.Test.Test: imxPPML.Test.Test
imxPreprocessModel: imxPreprocessModel
imxReplaceMethod: imxReplaceMethod
imxReplaceModels: Replace parts of a model
imxReplaceSlot: imxReplaceSlot
imxReportProgress: Report backend progress
imxReservedNames: imxReservedNames
imxReverseIdentifier: imxReverseIdentifier
imxRobustSE: imxRobustSE
imxRowGradients: imxRowGradients
imxSameType: imxSameType
imxSeparatorChar: imxSeparatorChar
imxSfClient: imxSfClient
imxSimpleRAMPredicate: imxSimpleRAMPredicate
imxSparseInvert: Sparse symmetric matrix invert
imxSquareMatrix: imxSquareMatrix
imxSymmetricMatrix: imxSymmetricMatrix
imxTypeName: imxTypeName
imxUntitledName: imxUntitledName
imxUntitledNumber: imxUntitledNumber
imxUntitledNumberReset: imxUntitledNumberReset
imxUpdateModelValues: imxUpdateModelValues
imxVariableTypes: imxVariableTypes
imxVerifyMatrix: imxVerifyMatrix
imxVerifyModel: imxVerifyModel
imxVerifyName: imxVerifyName
imxVerifyReference: imxVerifyReference
imxWlsChiSquare: Calculate Chi Square for a WLS Model
imxWlsStandardErrors: Calculate Standard Errors for a WLS Model
jointdata_data: Joint Ordinal and continuous variables to be modeled together
latentMultipleRegExample1_data: Example data for multiple regression among latent variables
latentMultipleRegExample2_data: Example data for multiple regression among latent variables
logm: Matrix logarithm
LongitudinalOverdispersedCounts: Longitudinal, Overdispersed Count Data
multiData1_data: Data for multiple regression
mxAlgebra: Create MxAlgebra Object
MxAlgebra-class: MxAlgebra Class
MxAlgebraFormula-class: MxAlgebraFormula
mxAlgebraFromString: Create MxAlgebra object from a string
mxAlgebraObjective: DEPRECATED: Create MxAlgebraObjective Object
mxAutoStart: Automatically set starting values for an MxModel
mxAvailableOptimizers: mxAvailableOptimizers
MxBaseExpectation-class: MxBaseExpectation
MxBaseFitFunction-class: MxBaseFitFunction
MxBaseNamed-class: MxBaseNamed
MxBaseObjectiveMetaData-class: MxBaseObjectiveMetaData
mxBootstrap: Repeatedly estimate model using resampling with replacement
mxBootstrapEval: Evaluate Values in a bootstrapped MxModel
mxBounds: Create MxBounds Object
MxBounds-class: MxBounds Class
MxCharOrList-class: A character, list or NULL
MxCharOrLogical-class: A character or logical
MxCharOrNumber-class: A character or integer
mxCheckIdentification: Check that a model is locally identified
mxCI: Create mxCI Object
MxCI-class: MxCI Class
mxCompare: Assign Model Parameters
mxComputeBootstrap: Repeatedly estimate model using resampling with replacement
MxCompute-class: MxCompute
mxComputeConfidenceInterval: Find likelihood-based confidence intervals
mxComputeDefault: Default compute plan
mxComputeEM: Fit a model using DLR's (1977) Expectation-Maximization (EM)...
mxComputeGradientDescent: Optimize parameters using a gradient descent optimizer
mxComputeHessianQuality: Compute the quality of the Hessian
mxComputeIterate: Repeatedly invoke a series of compute objects until change is...
mxComputeNelderMead: Optimize parameters using a variation of the Nelder-Mead...
mxComputeNewtonRaphson: Optimize parameters using the Newton-Raphson algorithm
mxComputeNothing: Compute nothing
mxComputeNumericDeriv: Numerically estimate Hessian using Richardson extrapolation
mxComputeOnce: Compute something once
mxComputeReportDeriv: Report derivatives
mxComputeReportExpectation: Report expectation
mxComputeSequence: Invoke a series of compute objects in sequence
mxComputeStandardError: Compute standard errors given the Hessian or inverse Hessian
mxComputeTryHard: Repeatedly attempt a compute plan until successful
mxConstraint: Create MxConstraint Object
MxConstraint-class: Class '"MxConstraint"'
mxData: Create MxData Object
MxData-class: MxData Class
mxDataDynamic: Create dynamic data
MxDataFrameOrMatrix-class: MxDataFrameOrMatrix
MxDataStatic-class: Create static data
mxDataWLS: Create MxData Object for Least Squares (WLS, DLS, ULS)...
MxDirectedGraph-class: MxDirectedGraph
mxEval: Evaluate Values in MxModel
mxEvaluateOnGrid: Evaluate an algebra on an abscissa grid and collect column...
mxExpectationBA81: Create a Bock & Aitkin (1981) expectation
mxExpectationGREML: Create MxExpectationGREML Object
MxExpectationGREML-class: Class "MxExpectationGREML"
mxExpectationHiddenMarkov: Hidden Markov expectation
mxExpectationLISREL: Create MxExpectationLISREL Object
mxExpectationNormal: Create MxExpectationNormal Object
mxExpectationRAM: Create an MxExpectationRAM Object
mxExpectationStateSpace: Create an MxExpectationStateSpace Object
mxExpectationStateSpaceContinuousTime: Create an MxExpectationStateSpace Object
MxExpectationXclass: MxExpectation
mxFactor: Fail-safe Factors
mxFactorScores: Estimate factor scores and standard errors
mxFIMLObjective: DEPRECATED: Create MxFIMLObjective Object
mxFitFunctionAlgebra: Create MxFitFunctionAlgebra Object
MxFitFunction-class: MxFitFunction
mxFitFunctionGREML: Create MxFitFunctionGREML Object
MxFitFunctionGREML-class: Class '"MxFitFunctionGREML"'
mxFitFunctionML: Create MxFitFunctionML Object
mxFitFunctionMultigroup: Create MxFitFunctionMultigroup object
mxFitFunctionR: Create MxFitFunctionR Object
mxFitFunctionRow: Create an MxFitFunctionRow Object
mxFitFunctionWLS: Create MxFitFunctionWLS Object
MxFlatModel-class: MxFlatModel
mxGenerateData: Generate data based on an MxModel object
mxGetExpected: Extract the component from a model's expectation
mxGREMLDataHandler: Helper Function for Structuring GREML Data
MxInterval-class: MxInterval
mxKalmanScores: Estimate Kalman scores and error covariance matrices
MxLISRELModel-class: MxLISRELModel
mxLISRELObjective: Create MxLISRELObjective Object
MxListOrNull-class: An optional list
mxMakeNames: mxMakeNames
mxMatrix: Create MxMatrix Object
MxMatrix-class: MxMatrix Class
mxMI: Estimate Modification Indices for MxModel Objects
mxMLObjective: DEPRECATED: Create MxMLObjective Object
mxModel: Create MxModel Object
MxModel-class: MxModel Class
mxNormalQuantiles: mxNormalQuantiles
mxOption: Set or Clear an Optimizer Option
MxOptionalChar-class: An optional character
MxOptionalCharOrNumber-class: A character, integer, or NULL
MxOptionalLogical-class: An optional logical
MxOptionalMatrix-class: An optional matrix
MxOptionalNumeric-class: An optional numeric
mxPath: Create List of Paths
MxRAMGraph-class: MxRAMGraph
MxRAMMetaData-class: Meta Data for RAM
MxRAMModel-class: MxRAMModel
mxRAMObjective: DEPRECATED: Create MxRAMObjective Object
mxRename: Rename MxModel or a Submodel
mxRestore: Restore From Checkpoint File
mxRObjective: DEPRECATED: Create MxRObjective Object
mxRowObjective: DEPRECATED: Create MxRowObjective Object
mxRun: Send a Model to the Optimizer
mxSave: Save End State to Checkpoint File
mxSE: Compute standard errors in OpenMx
mxSetDefaultOptions: Reset global options to the default
mxSimplify2Array: Like simplify2array but works with vectors of different...
mxStandardizeRAMpaths: Standardize RAM models' path coefficients
mxThreshold: Create List of Thresholds
mxTryHard: Make multiple attempts to run a model
mxTypes: List Currently Available Model Types
mxVersion: Returns Current Version String
MxVersionType-class: A package_version or character
myAutoregressiveData_data: Example data with autoregressively related columns
myFADataRaw: Example 500-row dataset with 12 generated variables
myGrowthKnownClassData_data: Data for a growth mixture model with the true class...
myGrowthMixtureData_data: Data for a growth mixture model
myLongitudinalData_data: Data for a linear latent growth curve model
myRegData_data: Example regression data with correlated predictors
myRegDataRaw_data: Example regression data with correlated predictors
myTwinData_data: Twin data on weight and height
mzfData: MZ female example twin data
mzmData: MZ Male example data
Named-entity: Named Entities
nuclear_twin_design_data: Twin data from a nuclear family design
numHess1: numeric Hessian data 1
numHess2: numeric Hessian data 2
omxAllInt: All Interval Multivariate Normal Integration
omxApply: On-Demand Parallel Apply
omxAssignFirstParameters: Assign First Available Values to Model Parameters
omxBrownie: Make Brownies in OpenMx
omxCheckCloseEnough: Approximate Equality Testing Function
omxCheckEquals: Equality Testing Function
omxCheckError: Correct Error Message Function
omxCheckIdentical: Exact Equality Testing Function
omxCheckNamespace: omxCheckNamespace
omxCheckSetEquals: Set Equality Testing Function
omxCheckTrue: Boolean Equality Testing Function
omxCheckWarning: Correct Warning Message Function
omxCheckWithinPercentError: Approximate Percent Equality Testing Function
omxConstrainMLThresholds: omxConstrainMLThresholds
omxDefaultComputePlan: Construct default compute plan
omxDetectCores: omxDetectCores
omxGetNPSOL: omxGetNPSOL
omxGetParameters: Fetch Model Parameters
omxGetRAMDepth: omxGetRAMDepth
omxGraphviz: Show RAM Model in Graphviz Format
omxLapply: On-Demand Parallel Lapply
omxLocateParameters: Summarize Model Parameters
omxLogical: Logical mxAlgebra() operators
omxManifestModelByParameterJacobian: Estimate the Jacobian of manifest model with respect to...
omxMatrixOperations: MxMatrix operations
omxMnor: Multivariate Normal Integration
omxNameAnonymousParameters: omxNameAnonymousParameters
omxParallelCI: omxParallelCI
omxQuotes: omxQuotes
omxRAMtoML: omxRAMtoML
omxRMSEA: Get the RMSEA with confidence intervals from model
omxSapply: On-Demand Parallel Sapply
omxSaturatedModel: Create Reference (Saturated and Independence) Models
omxSelectRowsAndCols: Filter rows and columns from an mxMatrix
omxSetParameters: Assign Model Parameters
omxSymbolTable: Internal OpenMx algebra operations
OpenMx: OpenMx: An package for Structural Equation Modeling and...
ordinalTwinData: Data for ordinal twin model
rvectorize: Vectorize By Row
summary.MxModel: Model Summary
tr: trace
twinData: Australian twin sample biometric data.
twin_NA_dot_data: Twin data on weight and height
vec2diag: Create Diagonal Matrix From Vector
vech: Half-vectorization
vech2full: Inverse Half-vectorization
vechs: Strict Half-vectorization
vechs2full: Inverse Strict Half-vectorization

Functions

$,BaseCompute-method Man page
$,MxAlgebra-method Man page
$,MxBaseExpectation-method Man page
$,MxBaseFitFunction-method Man page
$,MxConstraint-method Man page
$,MxData-method Man page
$,MxFlatModel-method Man page
$,MxInterval-method Man page
$,MxMatrix-method Man page
$,MxModel-method Man page
$,MxPath-method Man page
$,MxThreshold-method Man page
$<-,BaseCompute-method Man page
$<-,MxAlgebra-method Man page
$<-,MxBaseExpectation-method Man page
$<-,MxBaseFitFunction-method Man page
$<-,MxConstraint-method Man page
$<-,MxData-method Man page
$<-,MxFlatModel-method Man page
$<-,MxInterval-method Man page
$<-,MxLISRELModel-method Man page
$<-,MxMatrix-method Man page
$<-,MxModel-method Man page
$<-,MxPath-method Man page
$<-,MxRAMModel-method Man page
$<-,MxThreshold-method Man page
BaseCompute-class Man page
Bollen Man page
DiagMatrix-class Man page
DollarNames.MxModel Source code
EvalInternal Source code
FullMatrix-class Man page
GREMLFixEffList Source code
GREMLFixEffListHelper Source code
HS.ability.data Man page
HS.fake.data Man page
IdenMatrix-class Man page
KalmanFilter Source code
LocateOptionalMatrix Source code
LongitudinalOverdispersedCounts Man page
LowerMatrix-class Man page
MxAlgebra Man page
MxAlgebra-class Man page
MxAlgebraFormula Man page
MxAlgebraFormula-class Man page
MxBaseExpectation-class Man page
MxBaseFitFunction-class Man page
MxBaseNamed Man page
MxBaseNamed-class Man page
MxBaseObjectiveMetaData Man page
MxBaseObjectiveMetaData-class Man page
MxBounds Man page
MxBounds-class Man page
MxCI Man page
MxCharOrList-class Man page
MxCharOrLogical-class Man page
MxCharOrNumber-class Man page
MxCompute Man page
MxCompute-class Man page
MxComputeBootstrap-class Man page
MxComputeConfidenceInterval-class Man page
MxComputeDefault-class Man page
MxComputeEM-class Man page
MxComputeGradientDescent-class Man page
MxComputeHessianQuality-class Man page
MxComputeIterate-class Man page
MxComputeNelderMead Man page
MxComputeNelderMead-class Man page
MxComputeNewtonRaphson-class Man page
MxComputeNumericDeriv-class Man page
MxComputeOnce-class Man page
MxComputeReportDeriv-class Man page
MxComputeReportExpectation-class Man page
MxComputeSequence-class Man page
MxComputeStandardError-class Man page
MxComputeTryHard-class Man page
MxConstraint Man page
MxConstraint-class Man page
MxData Man page
MxData-class Man page
MxDataDynamic-class Man page
MxDataFrameOrMatrix Man page
MxDataFrameOrMatrix-class Man page
MxDataStatic Man page
MxDataStatic-class Man page
MxDirectedGraph Man page
MxDirectedGraph-class Man page
MxExpectation Man page
MxExpectation-class Man page
MxExpectationBA81-class Man page
MxExpectationGREML Man page
MxExpectationGREML-class Man page
MxExpectationHiddenMarkov-class Man page
MxExpectationLISREL-class Man page
MxExpectationNormal-class Man page
MxExpectationRAM-class Man page
MxExpectationStateSpace-class Man page
MxFitFunction Man page
MxFitFunction-class Man page
MxFitFunctionAlgebra-class Man page
MxFitFunctionGREML Man page
MxFitFunctionGREML-class Man page
MxFitFunctionML-class Man page
MxFitFunctionMultigroup-class Man page
MxFitFunctionR-class Man page
MxFitFunctionRow-class Man page
MxFitFunctionWLS-class Man page
MxFlatModel-class Man page
MxInterval Man page
MxInterval-class Man page
MxLISRELModel-class Man page
MxListOrNull-class Man page
MxMatrix Man page
MxMatrix-class Man page
MxModel Man page
MxModel-class Man page
MxNonNullData-class Man page
MxOptionalChar-class Man page
MxOptionalCharOrNumber-class Man page
MxOptionalLogical-class Man page
MxOptionalMatrix-class Man page
MxOptionalNumeric-class Man page
MxPath-class Man page
MxRAMGraph Man page
MxRAMGraph-class Man page
MxRAMMetaData-class Man page
MxRAMModel-class Man page
MxThreshold-class Man page
MxVersionType-class Man page
Named-entities Man page
Named-entity Man page
OpenMx Man page
OpenMx-package Man page
PPML.Check.UseOptimizer Source code
PPML.CheckApplicable Source code
PPML.Post.UnfoldNHEV Source code
PPML.Pre.FakeLatents Source code
PPML.Pre.FixNHEV Source code
PPML.Pre.UpdateSolveType Source code
PPML.SolveOrPartialSolve Source code
PPML.Split Source code
PPML.Test.Battery.LowLevel Source code
PPML.Test.CheckFits Source code
PPML.Tool.CheckPPMLDidEqualOrBetter Source code
PPML.Tool.EnumerateMissingnessPatterns Source code
PPML.Tool.EnumeratePermutations Source code
PPML.Tool.PathToMatrix Source code
PPML.Tool.fakeLatentFoldout Source code
PPML.Transform Source code
PPMLClassifyLatents Source code
PPMLMissingData Source code
PPMLTransformModel Source code
RAMrfs Source code
RAMtoMLHelper Source code
ReferenceModelHelper Source code
SBMatchHelper Source code
SdiagMatrix-class Man page
StandMatrix-class Man page
SymmMatrix-class Man page
THFrankenmodel Source code
UnitMatrix-class Man page
ZeroMatrix-class Man page
[,MxMatrix,ANY,ANY,ANY-method Man page
[,MxMatrix-method Man page
[<-,MxMatrix,ANY,ANY,ANY-method Man page
[<-,MxMatrix-method Man page
[[,MxFlatModel-method Man page
[[,MxMatrix-method Man page
[[,MxModel-method Man page
[[<-,MxFlatModel-method Man page
[[<-,MxLISRELModel-method Man page
[[<-,MxMatrix-method Man page
[[<-,MxModel-method Man page
[[<-,MxRAMModel-method Man page
\%&\% Man page
\%^\% Man page
addAlgebraDetection Source code
addBindMatrices Source code
addEndogenousMatrices Source code
addEndogenousMeansLISREL Source code
addEntriesLISREL Source code
addEntriesRAM Source code
addExoEndoMatrices Source code
addExogenousMatrices Source code
addExogenousMeansLISREL Source code
addExpectationDetection Source code
addFitFunctionDetection Source code
addFormulaDetection Source code
addMatrixDetection Source code
addSingleNamedEntity Source code
addVariablesAS Source code
addVariablesHelper Source code
addVariablesLISREL Source code
addVariablesM Source code
addVariablesMatrix Source code
addVariablesMatrixLISREL Source code
addVariablesMatrixM Source code
addVariablesRAM Source code
adjustDefaultNumericDeriv Source code
aggregateSubrefmodels Source code
algebraEliminateObjectiveFunctions Source code
algebraErrorChecking Source code
algebraSymbolCheck Source code
all.false Source code
all.na Source code
allArgsMatrices Source code
as.MxMatrix.MxThreshold Source code
as.numeric.preserve Source code
assignAnonymousNames Source code
assignDimnames Source code
assignNewMatrixStuff Source code
autoStartDataHelper Source code
availableName Source code
boundsMet Source code
buildCErr Source code
buildFreeVarGroupList Source code
calculateConstraints Source code
calculateConstraintsHelper Source code
calculateTiming Source code
catFitStatistics Source code
checkAnonymousFreeParameters Source code
checkBounds Source code
checkConstraintEvaluation Source code
checkEqualDimensions Source code
checkEvaluation Source code
checkLISRELargument Source code
checkLISRELmeans Source code
checkLISRELmeansHelper Source code
checkNameAlignment Source code
checkNamespaceAlgebra Source code
checkNamespaceConstraint Source code
checkNamespaceFormula Source code
checkNamespaceFormulaAllowCharacters Source code
checkNamespaceHelper Source code
checkNamespaceIdentifier Source code
checkNamespaceMatrix Source code
checkNumberOrdinalColumns Source code
checkNumericData Source code
checkResetData Source code
checkSSMConformable Source code
checkSSMNotMissing Source code
checkSSMargument Source code
checkStringArgument Source code
checkThreshnames Source code
checkVariables Source code
checkVariablesHelper Source code
checkWLSIdentification Source code
checkZeroDimensions Source code
clearModifiedSinceRunRecursive Source code
coef.MxModel Source code
collectBaseStatistics Source code
collectComponents Source code
collectComponentsHelper Source code
collectDatasets Source code
collectDatasetsHelper Source code
collectExpectations Source code
collectExpectationsHelper Source code
collectFitFunctions Source code
collectFitFunctionsHelper Source code
collectMatrices Source code
collectMatricesHelper Source code
collectStatistics Source code
combineDefaultOptions Source code
combinePairs Source code
compareBounds Source code
componentCombination Source code
computeAlgebra Source code
computeFValue Source code
computeFitStatistics Source code
computeMatrix Source code
computeOptimizationStatistics Source code
confidenceIntervalHelper Source code
constraintsToAlgebras Source code
constraintsToAlgebrasHelper Source code
containsCycle Source code
convertAlgebras Source code
convertComputes Source code
convertConstraints Source code
convertDatasets Source code
convertExpectationFunctions Source code
convertFitFunctions Source code
convertFormula Source code
convertFormulaInsertModel Source code
convertRAMtoMLModel Source code
convertSingleAlgebra Source code
convertSingleConstraint Source code
createMatrixA Source code
createMatrixF Source code
createMatrixLISREL Source code
createMatrixM Source code
createMatrixS Source code
createNewInterval Source code
createNewName Source code
createOppositeF Source code
createSimilarInterval Source code
cvectorize Man page Source code
cycleDetection Source code
cycleVisitor Source code
definitionDependencyList Source code
definitionStartingValue Source code
demoOneFactor Man page
demoTwoFactor Man page
deparseDimnames Source code
deparseVector Source code
detectSBMatches Source code
diag2vec Man page Source code
diffLists Source code
diffS4Objects Source code
dim,MxMatrix-method Man page
dimnames,MxAlgebra-method Man page
dimnames,MxMatrix,ANY-method Man page
dimnames,MxMatrix-method Man page
dimnames<-,MxAlgebra,ANY-method Man page
dimnames<-,MxAlgebra-method Man page
dimnames<-,MxMatrix,ANY-method Man page
dimnames<-,MxMatrix-method Man page
displayAlgebra Source code
displayConstraint Source code
displayExpectationLISREL Source code
displayFlatModel Source code
displayInterval Source code
displayMatrix Source code
displayModel Source code
displayMxData Source code
displayMxDataDynamic Source code
displayMxExpectationNormal Source code
displayMxExpectationRAM Source code
displayMxExpectationStateSpace Source code
displayMxFitFunctionAlgebra Source code
displayMxFitFunctionML Source code
displayMxFitFunctionWLS Source code
displayPath Source code
displayRFitFun Source code
displayRowFitFunction Source code
displayThreshold Source code
doFlatNamespaceSearch Source code
doFlatNamespaceSearchReplace Source code
doLocateIndex Source code
dzfData Man page
dzmData Man page
dzoData Man page
ecdftable Source code
eigenval Man page Source code
eigenvec Man page Source code
eliminateObjectiveFunctions Source code
enumerateDatasets Source code
equalDimensions Source code
evaluateAlgebra Source code
evaluateAlgebraWithContext Source code
evaluateExpression Source code
evaluateMatrix Source code
evaluateMxObject Source code
evaluateSymbol Source code
example1 Man page
example2 Man page
expandConfidenceIntervals Source code
expandConfidenceIntervalsHelper Source code
expandIntervals Source code
expandPathConnect Source code
expandSingleInterval Source code
expectationFunctionAddEntities Source code
expectationFunctionConvertEntities Source code
expectationIsMissingMeans Source code
expectationIsMissingThresholds Source code
explode Source code
expm Man page Source code
extractElement Source code
extractFirst Source code
extractJoinKey Source code
extractJoinModel Source code
extractNAname Source code
extractSecond Source code
fMatrixTranslateNames Source code
factorExample1 Man page
factorScaleExample1 Man page
factorScaleExample2 Man page
factorize Source code
findDependencies Source code
findIntramodelDefVars Source code
findMatrix Source code
findSquareBrackets Source code
firstArgument Source code
fitFunctionAddEntities Source code
fitFunctionModifyEntities Source code
fitStatistics Source code
fitfunctionNumberObservations Source code
flatExtractMethod Source code
flatNamesMethod Source code
flatNamespaceList Source code
flatNamespaceModelSearchReplace Source code
flatNamespaceSearch Source code
flatNamespaceSearchReplace Source code
flatReplaceMethod Source code
formulaEliminateObjectiveFunctions Source code
formulaList Source code
freezeAlgebra Source code
freezeFitfunction Source code
freezeMatrix Source code
generateAlgebraHelper Source code
generateAlgebraList Source code
generateChildNames Source code
generateCommunicationList Source code
generateDataColumns Source code
generateDataList Source code
generateDataSummary Source code
generateDataThresholdColumns Source code
generateDefinitionList Source code
generateDeps Source code
generateDepthHelper Source code
generateIFAReferenceModels Source code
generateIntervalList Source code
generateIntervalListHelper Source code
generateLISRELDepth Source code
generateLabelsHelper Source code
generateLabelsMatrix Source code
generateLocalNames Source code
generateLocalNamespace Source code
generateMatrixList Source code
generateMatrixReferences Source code
generateMatrixValuesHelper Source code
generateNormalData Source code
generateNormalReferenceModels Source code
generateOptionsList Source code
generateParameterList Source code
generateParameterListHelper Source code
generateParentNames Source code
generatePath Source code
generateRAMDepth Source code
generateRelationalData Source code
generateRowDataColumns Source code
generateSinglePath Source code
generateSubBindMatrices Source code
generateSubBindMatrix Source code
generateThresholdColumns Source code
generateTopBindMatrices Source code
generateValueHelper Source code
genericFitDependencies,MxBaseFitFunction-method Man page
getAllIndependents Source code
getAllModelNames Source code
getAnonymousCols Source code
getAnonymousNames Source code
getAnonymousRows Source code
getCpuTime Source code
getDataThresholdNames Source code
getEntities Source code
getEntityType Source code
getModelName Source code
getModelNameString Source code
getNotPathsOrData Source code
getPair Source code
getParameters Source code
getParametersHelper Source code
getPrecisionPerExpectation Source code
getValues Source code
hasSquareBrackets Source code
highlightProblem Source code
identicalNA Source code
ieigenval Man page Source code
ieigenvec Man page Source code
imxAddDependency Man page Source code
imxAutoOptionValue Man page Source code
imxCheckMatrices Man page Source code
imxCheckVariables Man page Source code
imxConDecMatrixSlots Man page Source code
imxConDecMatrixSlots,MxMatrix-method Man page
imxConstraintRelations Man page
imxConvertIdentifier Man page Source code
imxConvertLabel Man page Source code
imxConvertSubstitution Man page Source code
imxCreateMatrix Man page
imxCreateMatrix,DiagMatrix-method Man page
imxCreateMatrix,FullMatrix-method Man page
imxCreateMatrix,IdenMatrix-method Man page
imxCreateMatrix,LowerMatrix-method Man page
imxCreateMatrix,MxMatrix-method Man page Man page
imxCreateMatrix,SdiagMatrix-method Man page
imxCreateMatrix,StandMatrix-method Man page
imxCreateMatrix,SymmMatrix-method Man page
imxCreateMatrix,UnitMatrix-method Man page
imxCreateMatrix,ZeroMatrix-method Man page
imxDataTypes Man page
imxDefaultGetSlotDisplayNames Man page Source code
imxDeparse Man page
imxDeparse,IdenMatrix-method Man page
imxDeparse,MxAlgebra-method Man page
imxDeparse,MxConstraint-method Man page
imxDeparse,MxData-method Man page
imxDeparse,MxMatrix-method Man page Man page
imxDeparse,UnitMatrix-method Man page
imxDeparse,ZeroMatrix-method Man page
imxDeparse,matrix-method Man page
imxDependentModels Man page Source code
imxDetermineDefaultOptimizer Man page Source code
imxDiff Man page Source code
imxDmvnorm Man page Source code
imxEvalByName Man page Source code
imxExtractMethod Man page Source code
imxExtractNames Man page Source code
imxExtractReferences Man page Source code
imxExtractSlot Man page Source code
imxFlattenModel Man page Source code
imxFreezeModel Man page Source code
imxGenSwift Man page Source code
imxGenerateLabels Man page Source code
imxGenerateNamespace Man page Source code
imxGenericModelBuilder Man page Source code
imxGentleResize Man page Source code
imxGetExpectationComponent Man page Source code
imxGetSlotDisplayNames Man page Source code
imxHasConstraint Man page Source code
imxHasDefinitionVariable Man page Source code
imxHasNPSOL Man page Source code
imxHasOpenMP Man page Source code
imxIdentifier Man page Source code
imxIndependentModels Man page Source code
imxInitModel Man page
imxInitModel,MxLISRELModel-method Man page
imxInitModel,MxModel-method Man page
imxInitModel,MxRAMModel-method Man page
imxIsDefinitionVariable Man page Source code
imxIsPath Man page Source code
imxJiggle Man page Source code
imxLocateFunction Man page Source code
imxLocateIndex Man page Source code
imxLocateLabel Man page Source code
imxLog Man page Source code
imxLookupSymbolTable Man page Source code
imxModelBuilder Man page
imxModelBuilder,MxLISRELModel-method Man page
imxModelBuilder,MxModel-method Man page
imxModelBuilder,MxRAMModel-method Man page
imxModelTypes Man page
imxMpiWrap Man page Source code
imxOriginalMx Man page Source code
imxPPML Man page Source code
imxPPML.Test.Battery Man page Source code
imxPPML.Test.Test Man page Source code
imxPreprocessModel Man page Source code
imxReplaceMethod Man page Source code
imxReplaceModels Man page Source code
imxReplaceSlot Man page Source code
imxReportProgress Man page Source code
imxReservedNames Man page
imxReverseIdentifier Man page Source code
imxRobustSE Man page Source code
imxRowGradients Man page Source code
imxSameType Man page Source code
imxSeparatorChar Man page
imxSfClient Man page Source code
imxSimpleRAMPredicate Man page Source code
imxSparseInvert Man page Source code
imxSquareMatrix Man page
imxSquareMatrix,DiagMatrix-method Man page
imxSquareMatrix,IdenMatrix-method Man page
imxSquareMatrix,LowerMatrix-method Man page
imxSquareMatrix,MxMatrix-method Man page Man page
imxSquareMatrix,SdiagMatrix-method Man page
imxSquareMatrix,StandMatrix-method Man page
imxSquareMatrix,SymmMatrix-method Man page
imxSymmetricMatrix Man page
imxSymmetricMatrix,LowerMatrix-method Man page
imxSymmetricMatrix,MxMatrix-method Man page Man page
imxSymmetricMatrix,SdiagMatrix-method Man page
imxSymmetricMatrix,StandMatrix-method Man page
imxSymmetricMatrix,SymmMatrix-method Man page
imxTypeName Man page
imxTypeName,MxLISRELModel-method Man page
imxTypeName,MxModel-method Man page
imxTypeName,MxRAMModel-method Man page
imxUntitledName Man page Source code
imxUntitledNumber Man page Source code
imxUntitledNumberReset Man page Source code
imxUpdateModelValues Man page Source code
imxVariableTypes Man page
imxVerifyMatrix Man page
imxVerifyMatrix,DiagMatrix-method Man page
imxVerifyMatrix,FullMatrix-method Man page
imxVerifyMatrix,IdenMatrix-method Man page
imxVerifyMatrix,LowerMatrix-method Man page
imxVerifyMatrix,MxMatrix-method Man page Man page
imxVerifyMatrix,SdiagMatrix-method Man page
imxVerifyMatrix,StandMatrix-method Man page
imxVerifyMatrix,SymmMatrix-method Man page
imxVerifyMatrix,UnitMatrix-method Man page
imxVerifyMatrix,ZeroMatrix-method Man page
imxVerifyModel Man page
imxVerifyModel,MxLISRELModel-method Man page
imxVerifyModel,MxModel-method Man page
imxVerifyModel,MxRAMModel-method Man page
imxVerifyName Man page Source code
imxVerifyReference Man page Source code
imxWlsChiSquare Man page Source code
imxWlsStandardErrors Man page Source code
independentArgument Source code
indexCov2to1 Source code
indexCov4to2 Source code
insertAllPathsLISREL Source code
insertAllPathsRAM Source code
insertAllThresholdsRAM Source code
insertDefinitionVariable Source code
insertFixedValue Source code
insertFreeParameter Source code
insertLatentEndoPathsLISREL Source code
insertLatentExoPathsLISREL Source code
insertManifestEndoPathsLISREL Source code
insertManifestExoPathsLISREL Source code
insertMeansPathLISREL Source code
insertNumericValue Source code
insertOutsideValue Source code
insertPathLISREL Source code
insertPathRAM Source code
is.condenseSlots Source code
isArgMatrix Source code
isExpectation Source code
isHollow Source code
isLocalDefinitionVariable Source code
isNumber Source code
jointdata Man page
kalmanBackendScoreHelper Source code
kalmanDiscretize Source code
kalmanFrontendScoreHelper Source code
latentMultipleRegExample1 Man page
latentMultipleRegExample2 Man page
legalGlobalReference Source code
length,MxMatrix-method Man page
lgamma1p Man page Source code
limitMajorIterations Source code
lisrelFactorScoreHelper Source code
listArgument Source code
listArgumentLISREL Source code
listArgumentRAM Source code
localNamespaceSearchReplace Source code
locateBindFormula Source code
locateLabelHelper Source code
locateParametersHelper Source code
locateParametersInternal Source code
locateSubBindExpressions Source code
locateSubBindHelper Source code
locateTopBindExpressions Source code Source code
logLik.MxModel Source code
logm Man page Source code
logp2z Man page Source code
longData Man page
lookupNumericValue Source code
makeIntervalReference Source code
mat2param Source code
match.barg Source code
matchDefinitionVariable Source code
matchStack Source code
matrixCheckArgument Source code
matrixCheckDims Source code
matrixCheckErrors Source code
matrixDefinitions Source code
matrixNAdefault Source code
matrixToPaths Source code
meansToPaths Source code
memoize Source code
modelAddBounds Source code
modelAddBoundsHelper Source code
modelAddEntries Source code
modelAddIntervals Source code
modelAddVariables Source code
modelIsHollow Source code
modelModifyFilter Source code
modelRemoveBounds Source code
modelRemoveEntries Source code
modelRemoveIntervals Source code
modelRemoveVariables Source code
modifyDottedName Source code
multiData1 Man page
mxAlgebra Man page Source code
mxAlgebraFromString Man page Source code
mxAlgebraObjective Man page Source code
mxAutoStart Man page Source code
mxAvailableOptimizers Man page Source code
mxBootstrap Man page Source code
mxBootstrapEval Man page Source code
mxBootstrapEvalByName Man page Source code
mxBounds Man page Source code
mxCI Man page Source code
mxCheckIdentification Man page Source code
mxCompare Man page Source code
mxComputeBootstrap Man page Source code
mxComputeConfidenceInterval Man page Source code
mxComputeDefault Man page Source code
mxComputeEM Man page Source code
mxComputeGradientDescent Man page Source code
mxComputeHessianQuality Man page Source code
mxComputeIterate Man page Source code
mxComputeNelderMead Man page Source code
mxComputeNewtonRaphson Man page Source code
mxComputeNothing Man page Source code
mxComputeNumericDeriv Man page Source code
mxComputeOnce Man page Source code
mxComputeReportDeriv Man page Source code
mxComputeReportExpectation Man page Source code
mxComputeSequence Man page Source code
mxComputeStandardError Man page Source code
mxComputeTryHard Man page Source code
mxConstraint Man page Source code
mxConstraintFromString Man page Source code
mxData Man page Source code
mxDataDynamic Man page Source code
mxDataWLS Man page Source code
mxEval Man page Source code
mxEvalByName Man page Source code
mxEvaluateOnGrid Man page Source code
mxExpectationBA81 Man page Source code
mxExpectationGREML Man page Source code
mxExpectationHiddenMarkov Man page Source code
mxExpectationLISREL Man page Source code
mxExpectationNormal Man page Source code
mxExpectationRAM Man page Source code
mxExpectationSSCT Man page
mxExpectationStateSpace Man page Source code
mxExpectationStateSpaceContinuousTime Man page Source code
mxFIMLObjective Man page Source code
mxFactor Man page Source code
mxFactorScores Man page Source code
mxFitFunctionAlgebra Man page Source code
mxFitFunctionGREML Man page Source code
mxFitFunctionML Man page Source code
mxFitFunctionMultigroup Man page Source code
mxFitFunctionR Man page Source code
mxFitFunctionRow Man page Source code
mxFitFunctionWLS Man page Source code
mxGREMLDataHandler Man page Source code
mxGenerateData Man page Source code
mxGetExpected Man page
mxKalmanScores Man page Source code
mxLISRELObjective Man page Source code
mxMI Man page Source code
mxMLObjective Man page Source code
mxMakeNames Man page Source code
mxMatGetLayer Source code
mxMatSetLayer Source code
mxMatrix Man page Source code
mxModel Man page Source code
mxNormalQuantiles Man page Source code
mxOption Man page Source code
mxPath Man page Source code
mxRAMObjective Man page Source code
mxRObjective Man page Source code
mxRefModels Man page Source code
mxRename Man page Source code
mxRestore Man page Source code
mxRobustLog Man page Source code
mxRowObjective Man page Source code
mxRun Man page Source code
mxSE Man page Source code
mxSave Man page Source code
mxSetDefaultOptions Man page Source code
mxSimplify2Array Man page Source code
mxStandardizeRAMhelper Source code
mxStandardizeRAMpaths Man page Source code
mxSummary Man page
mxThreshold Man page Source code
mxTryHard Man page Source code
mxTryHardOrdinal Man page Source code
mxTryHardOrig Man page Source code
mxTryHardWideSearch Man page Source code
mxTryHardctsem Man page Source code
mxTypes Man page Source code
mxVersion Man page Source code
myAutoregressiveData Man page
myFADataRaw Man page
myGrowthKnownClassData Man page
myGrowthMixtureData Man page
myLongitudinalData Man page
myRegData Man page
myRegDataRaw Man page
myTwinData Man page
mzfData Man page
mzmData Man page
nameArgument Source code
nameGDOptimizerConstraintOutput Source code
nameOptimizerOutput Source code
named-entities Man page
named-entity Man page
names,MxConstraint-method Man page
names,MxFlatModel-method Man page
names,MxMatrix-method Man page
names,MxModel-method Man page
namespaceErrorMessage Source code
namespaceFindPath Source code
namespaceGetEntities Source code
namespaceGetModel Source code
namespaceGetParameters Source code
namespaceGetValues Source code
namespaceLocalSearch Source code
namespaceSearch Source code
namespaceSearchReplace Source code
namespaceSearchReplaceHelper Source code
ncol,MxMatrix-method Man page
new_cache Source code
nnzero Source code
normLogLik Source code
normLogLikGrad Source code
normLogLikHess Source code
npsolWarnings Source code
nrow,MxMatrix-method Man page
nuclear_twin_design_data Man page
numHess1 Man page
numHess2 Man page
numberObservations Source code
observedStatistics Source code
observedStatisticsHelper Source code
omxAllInt Man page Source code
omxAnd Man page Source code
omxApply Man page Source code
omxApproxEquals Man page Source code
omxAssignFirstParameters Man page Source code
omxBrownie Man page Source code
omxCbind Man page Source code
omxCheckCloseEnough Man page Source code
omxCheckEquals Man page Source code
omxCheckError Man page Source code
omxCheckIdentical Man page Source code
omxCheckNamespace Man page Source code
omxCheckSetEquals Man page Source code
omxCheckTrue Man page Source code
omxCheckWarning Man page Source code
omxCheckWithinPercentError Man page Source code
omxConstrainMLThresholds Man page Source code
omxDefaultComputePlan Man page Source code
omxDetectCores Man page
omxDnbinom Man page Source code
omxExponential Man page
omxGetNPSOL Man page Source code
omxGetParameters Man page Source code
omxGetRAMDepth Man page Source code
omxGraphviz Man page Source code
omxGreaterThan Man page Source code
omxLapply Man page Source code
omxLessThan Man page Source code
omxLocateParameters Man page Source code
omxLogical Man page
omxManifestModelByParameterJacobian Man page Source code
omxMatrixOperations Man page
omxMnor Man page Source code
omxNameAnonymousParameters Man page Source code
omxNormalQuantiles Man page
omxNot Man page Source code
omxOr Man page Source code
omxParallelCI Man page Source code
omxPnbinom Man page Source code
omxQuotes Man page Source code
omxRAMtoML Man page Source code
omxRMSEA Man page Source code
omxRbind Man page Source code
omxSapply Man page Source code
omxSaturatedModel Man page
omxSelectCols Man page Source code
omxSelectRows Man page Source code
omxSelectRowsAndCols Man page Source code
omxSetParameters Man page Source code
omxSymbolTable Man page
omxTranspose Man page Source code
onAttach Source code
onLoad Source code
ordinalCov2Cor Source code
ordinalTwinData Man page
ordinalizeDataHelper Source code
originalMxHelper Source code
p2z Man page Source code
pChiSqFun Source code
parameterDependencyList Source code
parameterList Source code
parameterListHelper Source code
parseDfArg Source code
parseLikelihoodArg Source code
pathCheckLengths Source code
pathCheckSingleLength Source code
pathCheckToAndFrom Source code
pathCheckVector Source code
pcLogLik Source code
populateDefInitialValues Source code
populateDefVarMatrix Source code
populateLowerTriangle Source code
populateMatrixSlot Source code
populateSdiagTriangle Source code
populateStandTriangle Source code
populateSymmTriangle Source code
preprocessDatasets Source code
print,BaseCompute-method Man page
print,MxAlgebra-method Man page
print,MxAlgebraFormula-method Man page
print,MxConstraint-method Man page
print,MxDataDynamic-method Man page
print,MxDataStatic-method Man page
print,MxExpectationBA81-method Man page
print,MxExpectationHiddenMarkov-method Man page
print,MxExpectationLISREL-method Man page
print,MxExpectationNormal-method Man page
print,MxExpectationRAM-method Man page
print,MxExpectationStateSpace-method Man page
print,MxFitFunctionAlgebra-method Man page
print,MxFitFunctionML-method Man page
print,MxFitFunctionR-method Man page
print,MxFitFunctionRow-method Man page
print,MxFitFunctionWLS-method Man page
print,MxFlatModel-method Man page
print,MxInterval-method Man page
print,MxMatrix-method Man page
print,MxModel-method Man page
print,MxNonNullData-method Man page
print,MxPath-method Man page
print,MxThreshold-method Man page
print.summary.mxmodel Source code
printOptions Source code
printSlot Source code
processDefaultOptionList Source code
processErrorConditions Source code
processHollowModel Source code
processParentData Source code
propagateModelName Source code
psLogLik Source code
qualifyNamesAlgebra Source code
qualifyNamesConstraint Source code
qualifyNamesData Source code
qualifyNamesFormula Source code
qualifyNamesInterval Source code
qualifyNamesMatrix Source code
ramFactorScoreHelper Source code
rc3Hess Source code
rc3LogLik Source code
rcLogLik Source code
refToDof Source code
refToLikelihood Source code
removeAllIntervals Source code
removeAllPathsRAM Source code
removeEntriesLISREL Source code
removeEntriesRAM Source code
removeMeansPathRAM Source code
removePathRAM Source code
removeSingleNamedEntity Source code
removeTail Source code
removeTrailingSeparator Source code
removeVariablesAS Source code
removeVariablesLISREL Source code
removeVariablesRAM Source code
renameAlgebra Source code
renameConfidenceIntervals Source code
renameConstraint Source code
renameFormula Source code
renameMatrix Source code
renameModelOutput Source code
renameReference Source code
renameSymbol Source code
replaceBindExpressions Source code
replaceBindFormula Source code
replaceBindHelper Source code
replaceMethodLISREL Source code
replaceModelsHelper Source code
replaceSubmodels Source code
reportCycle Source code
requireMeansVector Source code
requireMinManifests Source code
requireThresholds Source code
retainLabel Source code
rmseaConfidenceIntervalHelper Source code
rmseaPCloseHelper Source code
rowColToString Source code
runHelper Source code
rvectorize Man page Source code
safeQualifyNames Source code
selectSubModelFData Source code
setLikelihoods Source code
setNumberObservations Source code
setParametersCheckVector Source code
setParametersHelper Source code
setParametersMatrix Source code
setSquareBracketsHelper Source code
shareData Source code
shareDataHelper Source code
show,BaseCompute-method Man page
show,MxAlgebra-method Man page
show,MxAlgebraFormula-method Man page
show,MxConstraint-method Man page
show,MxDataDynamic-method Man page
show,MxDataStatic-method Man page
show,MxExpectationBA81-method Man page
show,MxExpectationHiddenMarkov-method Man page
show,MxExpectationLISREL-method Man page
show,MxExpectationNormal-method Man page
show,MxExpectationRAM-method Man page
show,MxExpectationStateSpace-method Man page
show,MxFitFunctionAlgebra-method Man page
show,MxFitFunctionML-method Man page
show,MxFitFunctionR-method Man page
show,MxFitFunctionRow-method Man page
show,MxFitFunctionWLS-method Man page
show,MxFlatModel-method Man page
show,MxInterval-method Man page
show,MxMatrix-method Man page
show,MxModel-method Man page
show,MxNonNullData-method Man page
show,MxPath-method Man page
show,MxThreshold-method Man page
showFitStatistics Source code
simplifyName Source code
single.false Source code
single.na Source code Source code
solve2x2 Source code
splitSubstitution Source code
splitThresholds Source code
squareBracketArgumentHelper Source code
sse Source code
standardizeCovMeansThresholds Source code
standardizeParams Source code
startsWithBind Source code
substituteOperators Source code
summarizeBootstrap Source code
summary.MxModel Man page Source code
threshLogLik Source code
thresholdCheckLengths Source code
thresholdCheckSingleLength Source code
thresholdSubset Source code
tr Man page Source code
transformAlgebraHelper Source code
transformAlgebras Source code
transitiveClosure Source code
transitiveClosureEntity Source code
translateErrorFormula Source code
translateErrorSymbol Source code
translateRowColName Source code
translateSquareBracketArgument Source code
trim Source code
tryCatch.W Source code
twinData Man page
twin_NA_dot Man page
typeArgument Source code
undoDataShare Source code
univariateMeanVarianceStatisticsHelper Source code
univariateThresholdStatisticsHelper Source code
updateExpectationDimnames Source code
updateLISRELMatrices Source code
updateLISRELMeans Source code
updateModelAlgebras Source code
updateModelCompute Source code
updateModelData Source code
updateModelEntitiesHelper Source code
updateModelEntitiesTargetModel Source code
updateModelExpectationDims Source code
updateModelExpectations Source code
updateModelMatrices Source code
updateModelValuesHelper Source code
updateRAMdimnames Source code
updateSSMdimnames Source code
updateThresholdDimnames Source code
variablesArgument Source code
variablesArgumentLISREL Source code
variablesArgumentRAM Source code
varsToCharacter Source code
varsToCharacter2 Source code
vec2diag Man page Source code
vech Man page Source code
vech2array Source code
vech2full Man page Source code
vechs Man page Source code
vechs2full Man page Source code
verifyCorrelationMatrix Source code
verifyCovarianceMatrix Source code
verifyExpectedObservedNames Source code
verifyMeans Source code
verifyMvnNames Source code
verifyNoConstraints Source code
verifyObservedNames Source code
verifySquare Source code
verifySquareBracket Source code
verifyThresholdNames Source code
verifyThresholds Source code
wideData Man page
wlsContinuousOnlyHelper Source code
writeDotFile Source code
zapExtraneousMatrices Source code

Files

inst
inst/CITATION
inst/models
inst/models/passing
inst/models/passing/GREML_intercept_check.R
inst/models/passing/DogChain.R
inst/models/passing/ifa-drm1.R
inst/models/passing/NelderMeadErrorTesting.R
inst/models/passing/simplestCI.R
inst/models/passing/ConstantSubstitution.R
inst/models/passing/mxSE_test.R
inst/models/passing/IntroSEM-MultiRegRaw.R
inst/models/passing/MLErrorConditions.R
inst/models/passing/TestUseOptimizer.R
inst/models/passing/StateSpaceErrorCheck.R
inst/models/passing/Simple--CheckCode6.R
inst/models/passing/JointFIMLRegressionTest.R
inst/models/passing/lmer-1.R
inst/models/passing/Acemix.R
inst/models/passing/FitMultigroup.R
inst/models/passing/AlgebraDeriv.R
inst/models/passing/cycle.R
inst/models/passing/SimpleAlgebraCIs.R
inst/models/passing/MultipleGroupRAM.R
inst/models/passing/startingValues.R
inst/models/passing/BivRegStdTestSE.R
inst/models/passing/SimpleRObjective.R
inst/models/passing/DefinitionTest2.R
inst/models/passing/GREML--testStarterFunctionWithMissingData.R
inst/models/passing/NelderMeadTest--eqConstraint.R
inst/models/passing/GeneralizedEstimatingEquations.R
inst/models/passing/MultilevelUniRandomSlopeInt.R
inst/models/passing/GREML_Error_Detection.R
inst/models/passing/NameParameterOverlap.R
inst/models/passing/AnalyticConstraintJacobians--LinearObjAndIneq.R
inst/models/passing/test_thresh_kept_in_order.R
inst/models/passing/Infeasible.R
inst/models/passing/IntroSEM-MultiRegStd.R
inst/models/passing/SimpleMLAlgebraCIs.R
inst/models/passing/xxm-3.R
inst/models/passing/mxmanual61-b.R
inst/models/passing/ACELRTCI20160808.R
inst/models/passing/oneLocusLikelihood.R
inst/models/passing/MultiRegStdTestSE.R
inst/models/passing/CheckpointingEveryIteration.R
inst/models/passing/StateSpaceInputs.R
inst/models/passing/Autoregressive_MatrixCov.R
inst/models/passing/xxm-4.R
inst/models/passing/UselessConstraint.R
inst/models/passing/testAllint.R
inst/models/passing/xxm-2.R
inst/models/passing/AlgebraTransformations.R
inst/models/passing/LisrelTypeCheck.R
inst/models/passing/LISRELFactorRegression_Matrix.R
inst/models/passing/IntroSEM-BivariateStd.R
inst/models/passing/MultivariateConstraint.R
inst/models/passing/LGC_PathCov.R
inst/models/passing/bivLognormDemo.R
inst/models/passing/mxVersion.R
inst/models/passing/IntroSEM-ThreeFactorScale1Test.R
inst/models/passing/Autoregressive_PathRaw.R
inst/models/passing/IntroSEM-OneFactorRaw.R
inst/models/passing/IntroSEM-BivariateRaw.R
inst/models/passing/BootstrapParallel.R
inst/models/passing/TwinAnalysis_Multivariate_Matrix_Raw.R
inst/models/passing/DefinitionMeansPath.R
inst/models/passing/RAMObjectiveErrors.R
inst/models/passing/DefaultComputePlanTest.R
inst/models/passing/IgnoreFixedConfidenceIntervals.R
inst/models/passing/BivRegRawTestSE.R
inst/models/passing/vectorEqualsT.R
inst/models/passing/ifa-allna.R
inst/models/passing/StandardErrorsSimple.R
inst/models/passing/SummaryCheck.R
inst/models/passing/bivCorM.R
inst/models/passing/twoLocusLikelihood.R
inst/models/passing/univACE_drop_helper.R
inst/models/passing/MultipleGroupRAMconstraint.R
inst/models/passing/LCAlazarsfeld-rewrite.R
inst/models/passing/data
inst/models/passing/data/brim.student.csv
inst/models/passing/data/jointdata.txt
inst/models/passing/data/nicsGarbage.ord
inst/models/passing/data/one-factor-reference.dot
inst/models/passing/data/sim1.mz
inst/models/passing/data/g341-19.dat
inst/models/passing/data/mddndzf.dat
inst/models/passing/data/dLL.csv
inst/models/passing/data/sim1.dz
inst/models/passing/data/myLongitudinalData.txt
inst/models/passing/data/multiData.csv
inst/models/passing/data/myAutoregressiveData.txt
inst/models/passing/data/lazarsfeld.ord
inst/models/passing/data/datawide.csv
inst/models/passing/nonlinearDefinitionTest.R
inst/models/passing/MatrixCreation.R
inst/models/passing/rfitfunc.R
inst/models/passing/InitializationErrorDetection.R
inst/models/passing/jointFactorModelsTest.R
inst/models/passing/evalOnGrid.R
inst/models/passing/RenameAndSummary.R
inst/models/passing/NamesReferencesErrorDetection.R
inst/models/passing/UnivHetModTwinAnalysis_MatrixRawOrdNIQmfFv3.R
inst/models/passing/NelderMead--bothConstraintTypes.R
inst/models/passing/OrdinalTestAlgebra.R
inst/models/passing/defvaralgebra.R
inst/models/passing/LISRELExoEndoOnly.R
inst/models/passing/NelderMeadTest--ineqConstraints.R
inst/models/passing/multilevelLatentRegression.R
inst/models/passing/AnalyticConstraintJacobians--Eq_and_Ineq.R
inst/models/passing/ConfidenceIntervalsDefVar.R
inst/models/passing/DataErrorDetection.R
inst/models/passing/dmvnorm.R
inst/models/passing/MxTryHardTest.R
inst/models/passing/HMM-multigroup.R
inst/models/passing/RemoveEntriesTest.R
inst/models/passing/Autoregressive_Transpose_MatrixRaw.R
inst/models/passing/AnalyticConstraintJacobians--PowellBenchmark.R
inst/models/passing/RAM-FIML-defvars.R
inst/models/passing/ModelIndexErrorChecking.R
inst/models/passing/OrdinalPathTest.R
inst/models/passing/thresholdModel1Factor3Variate5000.R
inst/models/passing/SimpleConfidenceIntervals.R
inst/models/passing/ifa-missingdata.R
inst/models/passing/IntroSEM-ThreeLatentMediationTest1.R
inst/models/passing/LISRELFactorRegressionWithMeans_MatrixRaw.R
inst/models/passing/InvalidCovarianceMLObjective.R
inst/models/passing/OrdinalTest.R
inst/models/passing/Tiny_GREML_model_for_full_debug_logging.R
inst/models/passing/TestRowObjective.R
inst/models/passing/Autoregressive_Tree_Path.R
inst/models/passing/xxm-1.R
inst/models/passing/CIduplicates.R
inst/models/passing/Acemix2.R
inst/models/passing/lmer-2.R
inst/models/passing/ModelTransformTest.R
inst/models/passing/DefinitionMeans.R
inst/models/passing/SimpleCovariance.R
inst/models/passing/mxmanual31-a.R
inst/models/passing/AugmentedGREMLfitfunction.R
inst/models/passing/mxSave.R
inst/models/passing/FIMLLikelihoodFrontend.R
inst/models/passing/OneFactorModel_PathCovReverse.R
inst/models/passing/tangleF.R
inst/models/passing/automaticStarts.R
inst/models/passing/UnivariateRandomInterceptWide.R
inst/models/passing/stdizedRAMpaths--UserProvidedCov.R
inst/models/passing/LAD--CheckCode6.R
inst/models/passing/IntroSEM-ThreeLatentMultipleRegTest2.R
inst/models/passing/IntroSEM-OneFactorCov.R
inst/models/passing/univSatM.R
inst/models/passing/univACEP.R
inst/models/passing/ModelRemovePaths.R
inst/models/passing/ACEDuplicateMatrices.R
inst/models/passing/check_models_can_be_rerun.R
inst/models/passing/omxMnor.R
inst/models/passing/ContinuousOnlyWLSTest.R
inst/models/passing/TestRowObjectiveExistenceVector.R
inst/models/passing/IntroSEM-ThreeLatentMediationTest2.R
inst/models/passing/NormalML.R
inst/models/passing/Rampart1.R
inst/models/passing/BogusDefinitionVariables.R
inst/models/passing/jointFactorWls.R
inst/models/passing/RawCov.R
inst/models/passing/IntroSEM-UnivariateStd.R
inst/models/passing/JointFIMLTest.R
inst/models/passing/SimpleConstraint.R
inst/models/passing/derivFilter.R
inst/models/passing/MxBoundsTesting.R
inst/models/passing/joinErrors.R
inst/models/passing/rowAlgTest140708.R
inst/models/passing/HMM-defvar.R
inst/models/passing/LISRELFactorRegressionWithMeans_Matrix.R
inst/models/passing/StateSpaceMissingData.R
inst/models/passing/GREML--polyphenotype.R
inst/models/passing/testNumericDerivWithConstraintWarning.R
inst/models/passing/StateSpaceAlg.R
inst/models/passing/MultipleRegression_MatrixRawReverse.R
inst/models/passing/AlgebraErrorDetection.R
inst/models/passing/AlgebraComputePassing.R
inst/models/passing/MultipleGroupWLS.R
inst/models/passing/IntroSEM-MultivariateRegRaw.R
inst/models/passing/StateSpaceOsc.R
inst/models/passing/LGC_MatrixCov.R
inst/models/passing/NelderMeadTest.R
inst/models/passing/Autoregressive_Transpose_MatrixCov.R
inst/models/passing/Substitutions.R
inst/models/passing/IntroSEM-UnivariateRaw.R
inst/models/passing/SubStateSpaceOsc.R
inst/models/passing/checkStandardizedLoadingsEtcetera.R
inst/models/passing/startingValues2.R
inst/models/passing/WarmStartTest.R
inst/models/passing/MatrixErrorDetection.R
inst/models/passing/TwinAnalysisLikelihoodVector.R
inst/models/passing/mxLog.R
inst/models/passing/LCAlazarsfeld.R
inst/models/passing/GraphvizTest.R
inst/models/passing/IntroSEM-ThreeLatentMultipleRegTest1.R
inst/models/passing/fm-example2-2.R
inst/models/passing/Autoregressive_Tree_Matrix.R
inst/models/passing/FourAAAA.R
inst/models/passing/GREML--151123missingDataRegressionTest.R
inst/models/passing/GREML--minimal_test_model.R
inst/models/passing/ifa-grm1.R
inst/models/passing/ifa-drm-mg.R
inst/models/passing/ifa-lmp.R
inst/models/passing/SaturatedWLSTest.R
inst/models/passing/IntroSEM-ThreeFactorScale2Test.R
inst/models/passing/LISRELFactorRegressionWithMeansFIMLOrder_MatrixRaw.R
inst/models/passing/DataFrame.R
inst/models/passing/HMM-basic.R
inst/models/passing/Autoregressive_MatrixRaw.R
inst/models/passing/ifa-drm-mg2.R
inst/models/passing/SummaryFitStatistics.R
inst/models/passing/MxEvalDefinitionVar.R
inst/models/passing/SanityTest.R
inst/models/passing/mxmanual61-a.R
inst/models/passing/Autoregressive_PathCov.R
inst/models/passing/MultipleGroupML.R
inst/models/passing/RAMInverseTest.R
inst/models/passing/excludeVar.R
inst/models/failing
inst/models/failing/MultilevelLongFormatFailing.R
inst/models/failing/memprobmodel2.RData
inst/models/failing/CSOLNPmtcars.R
inst/models/failing/OrdinalLargeSample.R
inst/models/failing/PPML_test2L3M.R
inst/models/failing/no_longer_able_to_be_run
inst/models/failing/no_longer_able_to_be_run/categoricalDefinitionTest.R
inst/models/failing/no_longer_able_to_be_run/PPML_100days.R
inst/models/failing/no_longer_able_to_be_run/BivariateSaturated_WLSMatrixCov.R
inst/models/failing/no_longer_able_to_be_run/UnivariateTwinAnalysis20090925.R
inst/models/failing/no_longer_able_to_be_run/challengingCI.R
inst/models/failing/no_longer_able_to_be_run/ExtraOrdinalVars.R
inst/models/failing/SimpleConfidenceIntervals.R
inst/models/failing/check_RAM_paths_dont_overwrite.R
inst/models/failing/PPML_test2L4M.R
inst/models/failing/mx-scripts
inst/models/failing/mx-scripts/Autoregressive_MatrixCov.mx
inst/models/failing/mx-scripts/MultipleRegression_MatrixRaw.mx
inst/models/failing/mx-scripts/myRegData.txt
inst/models/failing/mx-scripts/Autoregressive_MatrixRaw.mx
inst/models/failing/mx-scripts/myFAData.txt
inst/models/failing/mx-scripts/MultipleRegression_MatrixCov.mx
inst/models/failing/mx-scripts/TwoFactorModel_MatrixCov.mx
inst/models/failing/mx-scripts/MultivariateRegression_MatrixRaw.mx
inst/models/failing/mx-scripts/SimpleRegression_MatrixRaw.mx
inst/models/failing/mx-scripts/TwoFactorModel_MatrixRaw.mx
inst/models/failing/mx-scripts/MultivariateRegression_MatrixCov.mx
inst/models/failing/mx-scripts/myAutoregressiveData.txt
inst/models/failing/lacks_mention_of_what_fails
inst/models/failing/lacks_mention_of_what_fails/NTF_design.R
inst/models/failing/All_models_that_seem_fine
inst/models/failing/All_models_that_seem_fine/ComputeOrderError.R
inst/models/failing/PPML_test2L4M_MultiLayer.R
inst/models/failing/thresholdsCross.R
inst/models/nightly
inst/models/nightly/mplus-ex9.12.R
inst/models/nightly/xxm-mlcfa.R
inst/models/nightly/DefinitionIloo.R
inst/models/nightly/thresholdModel1Factor5VariateWLS.R
inst/models/nightly/MIMIC.R
inst/models/nightly/MultilevelStateSpaceEx5.R
inst/models/nightly/GrowthMixtureModelRandomStarts.R
inst/models/nightly/xxm-hcfa.R
inst/models/nightly/wu-neale-2012-symmetry.R
inst/models/nightly/grm_in_fiml.R
inst/models/nightly/startsTestMissing.R
inst/models/nightly/OneFactorOrdinal_MatrixRaw.R
inst/models/nightly/FactorScores.R
inst/models/nightly/RAM-3Factor-96Indicators-covdata-a.R
inst/models/nightly/ModelIdentification.R
inst/models/nightly/ModificationIndexCheck.R
inst/models/nightly/RAM-3Factor-12Indicators-covdata-a.R
inst/models/nightly/PPML_test1L2M.R
inst/models/nightly/startsTestNoMissing.R
inst/models/nightly/RAM-3Factor-48Indicators-rawdata-a.R
inst/models/nightly/OneFactorOrdinal01_MatrixRaw.R
inst/models/nightly/thresholdModel1Factor8Variate.R
inst/models/nightly/ifa-2d-mg.R
inst/models/nightly/PPML_100days.R
inst/models/nightly/NelderMeadUnitTesting.R
inst/models/nightly/3LatentMultiRegWithContinuousModerator-d.R
inst/models/nightly/xxm-faces.R
inst/models/nightly/JointAutoStrat.R
inst/models/nightly/3LatentMultiRegWith2LevelModerator-a.R
inst/models/nightly/GREML_monophenotype_1GRM.R
inst/models/nightly/3LatentMultiRegWithContinuousModerator-c.R
inst/models/nightly/RAM-3Factor-24Indicators-megadata-a.R
inst/models/nightly/data
inst/models/nightly/data/ex9.12.dat
inst/models/nightly/data/sel.txt
inst/models/nightly/data/faces.xxm.RData
inst/models/nightly/data/lranslp.xxm.RData
inst/models/nightly/data/reisby.long.xxm.RData
inst/models/nightly/data/ex9.23.dat
inst/models/nightly/data/ex9.11.dat
inst/models/nightly/data/ms-data.csv
inst/models/nightly/data/NCSsim.dat
inst/models/nightly/data/g341-19.dat
inst/models/nightly/data/mlcfa.xxm.RData
inst/models/nightly/data/cai2009.csv
inst/models/nightly/data/ex9.1a.dat
inst/models/nightly/data/reisby.wide.xxm.RData
inst/models/nightly/data/hcfa.xxm.RData
inst/models/nightly/data/dLL.csv
inst/models/nightly/data/fakeSTARTSNoMissing.csv
inst/models/nightly/data/ContinuousTime.csv
inst/models/nightly/data/fakeSTARTSMissing.csv
inst/models/nightly/data/ex9.6.dat
inst/models/nightly/xxm-lgc.R
inst/models/nightly/thresholdModel1Factor5Variate.R
inst/models/nightly/fm-example2-1.R
inst/models/nightly/DefaultOptTolerance.R
inst/models/nightly/3LatentMultiRegWithContinuousModerator-e.R
inst/models/nightly/ifa-fisher-info.R
inst/models/nightly/3LatentMultiRegWith2LevelModerator-c.R
inst/models/nightly/ifa-drm-wide.R
inst/models/nightly/thresholdModel1Factor3Variate.R
inst/models/nightly/ifa-dLL.R
inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-a.R
inst/models/nightly/mplus-ex9.6.R
inst/models/nightly/ETC88.R
inst/models/nightly/brooke.R
inst/models/nightly/PPML_100days_cov_baseline.R
inst/models/nightly/RAM-3Factor-24Indicators-covdata-a.R
inst/models/nightly/StateSpaceContinuous.R
inst/models/nightly/multilevelLatentRegression2.R
inst/models/nightly/Extreme_Multiformity_chi.R
inst/models/nightly/3LatentMultiRegWithContinuousModerator-b.R
inst/models/nightly/PPML_test1L3M.R
inst/models/nightly/ifa-ms.R
inst/models/nightly/GREML_monophenotype_1GRM_GradDesc.R
inst/models/nightly/mplus-ex9.23.R
inst/models/nightly/RAM-3Factor-12Indicators-rawdata-a.R
inst/models/nightly/PPML_100days_raw_baseline.R
inst/models/nightly/ifa-cai2009.R
inst/models/nightly/mplus-ex9.1.R
inst/models/nightly/ifa-bifactor.R
inst/models/nightly/univACErSEM.R
inst/models/nightly/SkippedRows.R
inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-b.R
inst/models/nightly/RAM-3Factor-24Indicators-covdata-a-intervals.R
inst/models/nightly/JointWLS.R
inst/models/nightly/xxm-cfars.R
inst/models/nightly/fm-example2-4.R
inst/models/nightly/PPML_100days_raw.R
inst/models/nightly/3LatentMultiRegWith2LevelModerator-b.R
inst/models/nightly/RAM-3Factor-48Indicators-covdata-a.R
inst/models/nightly/fm-example2-8.R
inst/models/nightly/mplus-ex9.11.R
inst/models/nightly/RAM-3Factor-24Indicators-rawdata-a.R
inst/models/nightly/ifa-latent-2d.R
inst/models/nightly/ifa-meat-2tier.R
inst/models/nightly/RegimeSwitching_MatrixRawNoCholDifferentTransitions.R
inst/models/nightly/wu-neale-2012-lgc.R
inst/models/nightly/BootstrapParallelNightly.R
inst/models/nightly/ifa-meat-2d.R
inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-c.R
inst/models/nightly/ContinuousTime.R
inst/models/nightly/PPML_100days_cov.R
inst/models/nightly/AnalyticGradientTest.R
inst/models/nightly/3LatentMultiRegWithContinuousModerator-a.R
inst/models/nightly/RegimeSwitching_MatrixRawNoCholDifferentTransitionsAllFixed.R
inst/models/enormous
inst/models/enormous/RAM-3Factor-192Indicators-rawdata-a.R
inst/models/enormous/invert.R
inst/models/enormous/RAM-3Factor-192Indicators-covdata-a.R
inst/models/enormous/lib
inst/models/enormous/lib/stderrlib.R
inst/models/enormous/ifa-grm-se.R
inst/models/enormous/ifa-2pl-se.R
inst/models/enormous/rampart.R
inst/models/enormous/RAM-3Factor-96Indicators-rawdata-a.R
inst/models/enormous/RAM-3Factor-120Indicators-covdata-a.R
inst/models/enormous/ot2kSim.R
inst/models/enormous/ifa-4pl-se.R
inst/models/enormous/ifa-cyh2011-sim1.R
inst/models/enormous/ifa-bifactor-se.R
inst/models/enormous/ifa-cyh2011-sim2.R
inst/models/enormous/ifa-3pl-se.R
inst/models/enormous/wu-neale-2012-lgc.R
inst/models/codeRed
inst/models/codeRed/fail_on_re-run_entity_already_exists.R
inst/models/codeRed/umxACE_codeRed.R
inst/no-npsol
inst/mx-scripts
inst/mx-scripts/poly3dz.mx
inst/mx-scripts/acemix2.mx
inst/mx-scripts/two.mxo
inst/mx-scripts/two.mx
inst/mx-scripts/acemix.mx
inst/mx-scripts/univSatR1m.mx
inst/mx-scripts/DefinitionMeans.mx
inst/mx-scripts/bivSatR2.mx
inst/mx-scripts/mxmanual31-a.mx
inst/mx-scripts/LCAlazarsfeld.mxo
inst/mx-scripts/bivSatR1.mx
inst/mx-scripts/bivSatR1m.mx
inst/mx-scripts/one.mx
inst/mx-scripts/LCAlazarsfeld.mx
inst/mx-scripts/univSatR1.mx
inst/mx-scripts/ozbmi.dat
inst/mx-scripts/univSatR2.mx
inst/mx-scripts/bivHom.mx
inst/mx-scripts/ozbmi.rec
inst/mx-scripts/mxmanual61-b.mx
inst/mx-scripts/one.mxo
inst/mx-scripts/bivHet.mx
inst/mx-scripts/univACE.mx
inst/mx-scripts/mxmanual61-a.mx
inst/tools
inst/tools/mk-r-libs-user-dir
inst/tools/testNightlyPPML.R
inst/tools/install-sh
inst/tools/OpenMxInstaller.R
inst/tools/memoryTestModels.R
inst/tools/mxParser.py
inst/tools/testModels.R
inst/tools/docTestGenerator.sh
inst/tools/regressionTesting.sh
inst/tools/OpenMx.supp
inst/tools/sphinxToR.py
inst/tools/updateCopyright.sh
inst/tools/memoryTestModels.sh
inst/tools/failTestModels.R
inst/tools/findBuildNum.sh
inst/tools/dummyFunctions.R
inst/tools/testDocs.R
inst/tools/mxAlgebraParser.py
inst/tools/rprofTestModels.R
inst/tools/parallelTestModels.R
src
src/stop.c
src/nlopt.h
src/glue.cpp
src/Connectedness.h
src/slsqp.h
src/MarkovFF.cpp
src/omxRFitFunction.h
src/nanotimer_windows.h
src/ComputeNR.cpp
src/ComputeGD.cpp
src/omxGREMLExpectation.h
src/omxExportBackendState.cpp
src/multi_normal_sufficient.hpp
src/omxRFitFunction.cpp
src/omxWLSFitFunction.cpp
src/omxMLFitFunction.cpp
src/omxMatrix.cpp
src/omxMatrix.h
src/omxExportBackendState.h
src/dmvnorm.h
src/algebraOp.h
src/ComputeNM.h
src/omxData.h
src/omxStateSpaceExpectation.cpp
src/omxSymbolTable.cpp
src/fitMultigroup.h
src/AlgebraFunctions.h
src/omxExpectationBA81.cpp
src/omxImportFrontendState.h
src/omxHessianCalculation.cpp
src/omxCsolnp.h
src/merge.h
src/omxNPSOLSpecific.cpp
src/nanotimer_rtposix.h
src/omxFitFunction.h
src/matrix.cpp
src/ssMLFit.cpp
src/omxAlgebraFitFunction.cpp
src/omxRowFitFunction.h
src/nlopt-util.h
src/omxFIMLFitFunction.h
src/omxImportFrontendState.cpp
src/MarkovExpectation.cpp
src/omxFitFunctionBA81.cpp
src/FellnerFitFunction.cpp
src/omxLISRELExpectation.h
src/omxFIMLSingleIteration.cpp
src/subnp.cpp
src/dmvnorm.cpp
src/omxSymbolTable.h
src/omxState.h
src/ba81quad.cpp
src/nlopt-internal.h
src/nloptcpp.h
src/omxAlgebra.h
src/omxGREMLExpectation.cpp
src/sadmvn.f
src/ba81quad.h
src/nanotimer_macosx.h
src/omxNormalExpectation.cpp
src/Makevars.in
src/omxBuffer.h
src/omxLISRELExpectation.cpp
src/general.c
src/ComputeGD.h
src/omxGREMLfitfunction.cpp
src/nanotimer_gettime.h
src/Compute.h
src/omxData.cpp
src/ComputeSD.cpp
src/omxAlgebra.cpp
src/Compute.cpp
src/nloptcpp.cpp
src/RAMInternal.h
src/glue.h
src/npsolswitch.h
src/ComputeSD.h
src/omxFitFunction.cpp
src/omxExpectation.cpp
src/omxExpectationBA81.h
src/Makevars.win
src/omxExpectation.h
src/omxRowFitFunction.cpp
src/autodep
src/ComputeNM.cpp
src/omxDefines.h
src/merge.cpp
src/omxRAMExpectation.cpp
src/options.c
src/optimize.c
src/fitMultigroup.cpp
src/finiteDifferences.h
src/nanotimer.cpp
src/slsqp.c
src/omxFIMLFitFunction.cpp
src/EnableWarnings.h
src/omxNPSOLSpecific.h
src/matrix.h
src/omxSadmvnWrapper.h
src/omxState.cpp
NAMESPACE
demo
demo/OneFactorOrdinal_MatrixRawRAM.R
demo/OneFactorMatrixDemo.R
demo/BivariateSaturated_MatrixRaw.R
demo/UnivariateSaturated.R
demo/TwoFactorModel_MatrixCov.R
demo/SimpleCheckpoint.R
demo/MultivariateRegression_MatrixRaw.R
demo/MultivariateRegression_MatrixCov.R
demo/mxThreshold.R
demo/MultipleRegression_MatrixRaw.R
demo/OneFactorOrdinal_MatrixRaw.R
demo/SimpleRegression_MatrixRaw.R
demo/OneFactorModel_PathCov.R
demo/UnivariateTwinAnalysis_MatrixRaw.R
demo/MultivariateRegression_PathCov.R
demo/OneFactorOrdinal01_MatrixRaw.R
demo/BivariateSaturated_MatrixRawCholesky.R
demo/BivariateSaturated_MatrixCovCholesky.R
demo/UnivariateSaturated_PathRaw.R
demo/RObjectiveLISRELFactorRegression.R
demo/OneFactorPathDemo.R
demo/TwoFactorModel_MatrixRaw.R
demo/data
demo/data/BivariateHeterogeneity1.csv
demo/data/BivariateHeterogeneity2.csv
demo/MultipleRegression_PathRaw.R
demo/OneFactorJoint_PathRaw.R
demo/BivariateHeterogeneity_PathRaw.R
demo/BivariateSaturated_MatrixCov.R
demo/BivariateSaturated.R
demo/MultipleRegression_PathCov.R
demo/UnivariateSaturated_PathCov.R
demo/MultivariateRegression_PathRaw.R
demo/OneFactorJoint_MatrixRawRAM.R
demo/OneFactorModel_MatrixCov.R
demo/GrowthMixtureModel_PathRaw.R
demo/DefinitionMeans_MatrixRaw.R
demo/OneFactorOrdinal_PathRaw.R
demo/BivariateSaturated_PathCov.R
demo/LISRELJointFactorModel.R
demo/DefinitionMeans_PathRaw.R
demo/OneFactorModel_LikelihoodVector.R
demo/RowObjectiveFIMLBivariateSaturated.R
demo/UnivariateSaturated_MatrixRaw.R
demo/00Index
demo/BivariateCorrelation.R
demo/TwoFactorModel_PathRaw.R
demo/TwoFactorModel_PathCov.R
demo/BivariateHeterogeneity_MatrixRaw.R
demo/omxConstrainMLThresholds.R
demo/SimpleRegression_PathCov.R
demo/AlternativeApproaches.R
demo/LatentGrowthCurveModel_PathRaw_ModelRec.R
demo/SimpleRegression_PathRaw.R
demo/LatentGrowthCurveModel_PathRaw_ObjectAdd.R
demo/MultipleRegression_MatrixCov.R
demo/RowObjectiveSimpleExamples.R
demo/MatrixAlgebra.R
demo/TwoLocusLikelihood.R
demo/UnivariateTwinAnalysis_PathRaw.R
demo/UnivariateSaturated_MatrixCov.R
demo/OneLocusLikelihood.R
demo/GrowthMixtureModel_MatrixRaw.R
demo/UnivariateTwinAnalysis.R
demo/SimpleRegression_MatrixCov.R
demo/OneFactorModel_PathRaw.R
demo/OneFactorModel_MatrixRaw.R
demo/BivariateSaturated_PathRaw.R
demo/LatentGrowthCurveModel_MatrixRaw.R
demo/LatentGrowthCurveModel_PathRaw.R
NEWS
data
data/myAutoregressiveData.txt.gz
data/numHess1.txt.gz
data/latentMultipleRegExample1.csv.gz
data/mzfData.txt.gz
data/myLongitudinalData.txt.gz
data/nuclear_twin_design_data.txt.gz
data/myRegData.txt.gz
data/multiData1.txt.gz
data/demoTwoFactor.csv.gz
data/dzmData.txt.gz
data/mzmData.txt.gz
data/twin_NA_dot.txt.gz
data/myGrowthMixtureData.txt.gz
data/myGrowthKnownClassData.txt.gz
data/factorExample1.csv.gz
data/myTwinData.txt.gz
data/example1.csv.gz
data/dzfData.txt.gz
data/ordinalTwinData.rda
data/myFADataRaw.txt.gz
data/Bollen.txt.gz
data/HS.fake.data.txt.gz
data/datalist
data/latentMultipleRegExample2.csv.gz
data/numHess2.txt.gz
data/demoOneFactor.csv.gz
data/myRegDataRaw.txt.gz
data/dzoData.txt.gz
data/example2.csv.gz
data/factorScaleExample2.csv.gz
data/jointdata.txt.gz
data/factorScaleExample1.csv.gz
data/LongitudinalOverdispersedCounts.rda
data/HS.ability.data.txt.gz
data/twinData.rda
R
R/MxCycleDetection.R
R/MxFitFunctionML.R
R/MxExpectationGREML.R
R/MxModelParameters.R
R/MxFitFunctionAlgebra.R
R/MxExpectationRAM.R
R/MxTypes.R
R/MxDetectCores.R
R/MxFIMLObjective.R
R/MxGraphviz.R
R/MxBaseNamed.R
R/MxMatrixFunctions.R
R/omxGetNPSOL.R
R/MxFlatSearchReplace.R
R/MxAvailableOptimizers.R
R/MxFitFunctionGREML.R
R/MxAutoStart.R
R/MxInterval.R
R/MxRobustSE.R
R/MxMultiModel.R
R/MxFlatModel.R
R/MxRename.R
R/MxCompute.R
R/MxSwift.R
R/MxData.R
R/MxSummary.R
R/MxConstraint.R
R/MxLISRELObjective.R
R/MxSquareBracket.R
R/MxExpectationHiddenMarkov.R
R/MxVersion.R.in
R/IdenMatrix.R
R/sysdata.rda
R/omxConstrainThresholds.R
R/MxMLObjective.R
R/MxApply.R
R/MxRObjective.R
R/MxBounds.R
R/MxCommunication.R
R/MxFitFunctionMultigroup.R
R/MxObjectiveMetaData.R
R/MxExpectationLISREL.R
R/OriginalMx.R
R/DefinitionVars.R
R/MxRowObjective.R
R/MxDeparse.R
R/MxDiff.R
R/UnitMatrix.R
R/MxFitFunction.R
R/MxRAMtoML.R
R/DiagMatrix.R
R/0ClassUnion.R
R/SymmMatrix.R
R/cache.R
R/MxOptions.R
R/MxErrorHandling.R
R/omxBrownie.R
R/MxFactorScores.R
R/MxFitFunctionRow.R
R/MxExpectationNormal.R
R/MxExpectationBA81.R
R/MxDataWLS.R
R/SdiagMatrix.R
R/MxExpectation.R
R/MxAlgebra.R
R/MxEval.R
R/MxRAMObjective.R
R/MxVersion.R
R/MxFitFunctionWLS.R
R/MxMatrix.R
R/ZeroMatrix.R
R/FullMatrix.R
R/MxUnitTesting.R
R/MxRAMMetaData.R
R/MxExpectationStateSpace.R
R/MxModel.R
R/StandMatrix.R
R/MxGraph.R
R/MxTryHard.R
R/MxSearchReplace.R
R/MxAlgebraObjective.R
R/MxRun.R
R/MxExponential.R
R/MxMI.R
R/MxAlgebraTransform.R
R/MxThreshold.R
R/LowerMatrix.R
R/MxLISRELModel.R
R/MxCompare.R
R/MxFitFunctionR.R
R/MxRestore.R
R/MxPPML.R
R/MxModelFunctions.R
R/MxSaturatedModel.R
R/MxSE.R
R/MxDependencies.R
R/MxAlgebraConvert.R
R/MxPath.R
R/zzz.R
R/MxModelDisplay.R
R/MxAlgebraFunctions.R
R/MxRAMModel.R
R/MxUntitled.R
R/MxNamespace.R
R/MxReservedNames.R
R/MxRunHelperFunctions.R
README.md
MD5
DESCRIPTION
configure
man
man/omxCheckWarning.Rd
man/imxPPML.Test.Test.Rd
man/mxRestore.Rd
man/imxHasDefinitionVariable.Rd
man/imxExtractNames.Rd
man/imxMpiWrap.Rd
man/MxAlgebraFormula-class.Rd
man/omxMatrixOperations.Rd
man/omxGetNPSOL.Rd
man/myAutoregressiveData_data.Rd
man/HS.ability.data.Rd
man/factorExample1_data.Rd
man/omxCheckSetEquals.Rd
man/imxConvertSubstitution.Rd
man/MxBaseObjectiveMetaData-class.Rd
man/MxCI-class.Rd
man/mxVersion.Rd
man/MxInterval-class.Rd
man/rvectorize.Rd
man/mxModel.Rd
man/mxAutoStart.Rd
man/imxGentleResize.Rd
man/MxModel-class.Rd
man/Bollen_data.Rd
man/mxComputeNothing.Rd
man/imxGenerateLabels.Rd
man/MxListOrNull-class.Rd
man/omxSymbolTable.Rd
man/dzmData.Rd
man/imxLocateLabel.Rd
man/imxSeparatorChar.Rd
man/eigenvec.Rd
man/omxGetParameters.Rd
man/latentMultipleRegExample2_data.Rd
man/mxGREMLDataHandler.Rd
man/MxData-class.Rd
man/mxFitFunctionMultigroup.Rd
man/mxPath.Rd
man/omxLogical.Rd
man/mxExpectationLISREL.Rd
man/imxIndependentModels.Rd
man/mxMakeNames.Rd
man/mxEvaluateOnGrid.Rd
man/imxConDecMatrixSlots.Rd
man/mxConstraint.Rd
man/imxDiff.Rd
man/MxLISRELModel-class.Rd
man/imxVariableTypes.Rd
man/Named-entity.Rd
man/vech.Rd
man/imxSameType.Rd
man/imxDependentModels.Rd
man/imxLocateFunction.Rd
man/imxUntitledNumberReset.Rd
man/MxConstraint-class.Rd
man/demoTwoFactor_data.Rd
man/mxMLObjective.Rd
man/imxVerifyMatrix.Rd
man/omxApply.Rd
man/omxManifestModelByParameterJacobian.Rd
man/omxMnor.Rd
man/MxFitFunction-class.Rd
man/imxPPML.Test.Battery.Rd
man/omxRMSEA.Rd
man/imxOriginalMx.Rd
man/MxCharOrList-class.Rd
man/imxReservedNames.Rd
man/mxKalmanScores.Rd
man/imxLookupSymbolTable.Rd
man/mxDataDynamic.Rd
man/omxNameAnonymousParameters.Rd
man/imxHasOpenMP.Rd
man/omxAllInt.Rd
man/nuclear_twin_design_data.Rd
man/omxDefaultComputePlan.Rd
man/myRegDataRaw_data.Rd
man/imxSymmetricMatrix.Rd
man/cvectorize.Rd
man/imxSimpleRAMPredicate.Rd
man/imxReplaceModels.Rd
man/mxComputeNewtonRaphson.Rd
man/omxCheckNamespace.Rd
man/imxDetermineDefaultOptimizer.Rd
man/mxBounds.Rd
man/mxExpectationStateSpaceContinuousTime.Rd
man/imxReplaceMethod.Rd
man/mxAvailableOptimizers.Rd
man/mxComputeIterate.Rd
man/imxConvertLabel.Rd
man/omxCheckCloseEnough.Rd
man/imxUntitledNumber.Rd
man/MxVersionType-class.Rd
man/MxRAMMetaData-class.Rd
man/myTwinData_data.Rd
man/omxCheckIdentical.Rd
man/logm.Rd
man/imxAutoOptionValue.Rd
man/mxComputeStandardError.Rd
man/mxStandardizeRAMpaths.Rd
man/MxExpectationXclass.Rd
man/mxCI.Rd
man/mxAlgebra.Rd
man/mxRename.Rd
man/mxGetExpected.Rd
man/imxJiggle.Rd
man/imxLocateIndex.Rd
man/MxCompute-class.Rd
man/jointdata_data.Rd
man/imxVerifyName.Rd
man/mxComputeReportDeriv.Rd
man/mxFitFunctionML.Rd
man/MxBounds-class.Rd
man/MxCharOrLogical-class.Rd
man/mxFitFunctionGREML.Rd
man/mxComputeNumericDeriv.Rd
man/mxSetDefaultOptions.Rd
man/imxPPML.Rd
man/MxBaseExpectation-class.Rd
man/example2_data.Rd
man/vech2full.Rd
man/imxModelTypes.Rd
man/mxBootstrapEval.Rd
man/omxQuotes.Rd
man/imxFlattenModel.Rd
man/imxSparseInvert.Rd
man/omxCheckWithinPercentError.Rd
man/myLongitudinalData_data.Rd
man/imxUpdateModelValues.Rd
man/imxModelBuilder.Rd
man/imxIdentifier.Rd
man/omxGetRAMDepth.Rd
man/mxCheckIdentification.Rd
man/MxOptionalNumeric-class.Rd
man/factorScaleExample2_data.Rd
man/mxDataWLS.Rd
man/numHess1.Rd
man/imxGenericModelBuilder.Rd
man/MxRAMModel-class.Rd
man/mxComputeSequence.Rd
man/ordinalTwinData.Rd
man/LongitudinalOverdispersedCounts.Rd
man/myGrowthMixtureData_data.Rd
man/MxOptionalCharOrNumber-class.Rd
man/MxFitFunctionGREML-class.Rd
man/mxMI.Rd
man/imxGenSwift.Rd
man/mxComputeBootstrap.Rd
man/dzfData.Rd
man/MxDirectedGraph-class.Rd
man/imxVerifyModel.Rd
man/omxCheckTrue.Rd
man/MxRAMGraph-class.Rd
man/mxExpectationGREML.Rd
man/BaseCompute-class.Rd
man/omxLapply.Rd
man/MxOptionalMatrix-class.Rd
man/omxBrownie.Rd
man/mxFitFunctionRow.Rd
man/imxHasConstraint.Rd
man/imxSfClient.Rd
man/omxCheckError.Rd
man/mxGenerateData.Rd
man/omxRAMtoML.Rd
man/mxData.Rd
man/mxExpectationStateSpace.Rd
man/imxReverseIdentifier.Rd
man/imxDefaultGetSlotDisplayNames.Rd
man/mxExpectationNormal.Rd
man/MxCharOrNumber-class.Rd
man/mxFitFunctionR.Rd
man/imxCheckMatrices.Rd
man/imxGetSlotDisplayNames.Rd
man/mxRAMObjective.Rd
man/mxExpectationRAM.Rd
man/imxPreprocessModel.Rd
man/omxSapply.Rd
man/mxAlgebraObjective.Rd
man/imxGenerateNamespace.Rd
man/imxEvalByName.Rd
man/omxCheckEquals.Rd
man/MxFlatModel-class.Rd
man/omxParallelCI.Rd
man/mxSimplify2Array.Rd
man/mxComputeGradientDescent.Rd
man/imxExtractMethod.Rd
man/myFADataRaw.Rd
man/omxDetectCores.Rd
man/MxExpectationGREML-class.Rd
man/summary.MxModel.Rd
man/MxAlgebra-class.Rd
man/omxSelectRowsAndCols.Rd
man/mxExpectationBA81.Rd
man/imxDataTypes.Rd
man/mxEval.Rd
man/imxUntitledName.Rd
man/mxFactorScores.Rd
man/imxLog.Rd
man/imxRobustSE.Rd
man/latentMultipleRegExample1_data.Rd
man/imxWlsChiSquare.Rd
man/vechs.Rd
man/mxBootstrap.Rd
man/imxReplaceSlot.Rd
man/MxDataStatic-class.Rd
man/mxTypes.Rd
man/mxComputeReportExpectation.Rd
man/mxFactor.Rd
man/mxRun.Rd
man/example1_data.Rd
man/vec2diag.Rd
man/omxConstrainMLThresholds.Rd
man/OpenMx.Rd
man/genericFitDependencies-MxBaseFitFunction-method.Rd
man/mxSE.Rd
man/mxComputeEM.Rd
man/imxRowGradients.Rd
man/imxIsDefinitionVariable.Rd
man/mxComputeDefault.Rd
man/MxOptionalLogical-class.Rd
man/imxConstraintRelations.Rd
man/factorScaleExample1_data.Rd
man/mxExpectationHiddenMarkov.Rd
man/mxLISRELObjective.Rd
man/mxComputeHessianQuality.Rd
man/imxExtractSlot.Rd
man/omxSetParameters.Rd
man/twin_NA_dot_data.Rd
man/omxSaturatedModel.Rd
man/imxWlsStandardErrors.Rd
man/mxNormalQuantiles.Rd
man/mxFitFunctionWLS.Rd
man/MxBaseFitFunction-class.Rd
man/mxThreshold.Rd
man/mxCompare.Rd
man/mxRowObjective.Rd
man/imxFreezeModel.Rd
man/imxExtractReferences.Rd
man/multiData1_data.Rd
man/mxComputeConfidenceInterval.Rd
man/twinData.Rd
man/imxSquareMatrix.Rd
man/imxCreateMatrix.Rd
man/imxTypeName.Rd
man/vechs2full.Rd
man/tr.Rd
man/omxAssignFirstParameters.Rd
man/imxInitModel.Rd
man/imxHasNPSOL.Rd
man/expm.Rd
man/imxConvertIdentifier.Rd
man/imxVerifyReference.Rd
man/MxBaseNamed-class.Rd
man/mxTryHard.Rd
man/mxMatrix.Rd
man/mxFitFunctionAlgebra.Rd
man/mzfData.Rd
man/mxAlgebraFromString.Rd
man/diag2vec.Rd
man/mzmData.Rd
man/dzoData.Rd
man/demoOneFactor_data.Rd
man/MxDataFrameOrMatrix-class.Rd
man/imxCheckVariables.Rd
man/imxDeparse.Rd
man/imxAddDependency.Rd
man/MxOptionalChar-class.Rd
man/omxGraphviz.Rd
man/mxFIMLObjective.Rd
man/myRegData_data.Rd
man/mxComputeOnce.Rd
man/myGrowthKnownClassData_data.Rd
man/imxReportProgress.Rd
man/imxDmvnorm.Rd
man/mxSave.Rd
man/mxRObjective.Rd
man/mxComputeNelderMead.Rd
man/imxIsPath.Rd
man/mxOption.Rd
man/mxComputeTryHard.Rd
man/omxLocateParameters.Rd
man/MxMatrix-class.Rd
man/numHess2.Rd
cleanup
CHANGES
OpenMx documentation built on May 20, 2017, 1:03 a.m.