Files in P2C2M

Posterior Predictive Checks of Coalescent Models

MD5

DESCRIPTION

NAMESPACE

inst/CITATION

inst/doc/P2C2M_Vignette.Rnw

inst/doc/P2C2M_Vignette.pdf inst/doc/P2C2M_Vignette.R inst/doc/P2C2M_CmdList.pdf

inst/msdir/rand2t.c

inst/msdir/rand1t.c

inst/msdir/ms.h

inst/msdir/rand1.c

inst/msdir/stats.c

inst/msdir/rand2.c

inst/msdir/sample_stats.c

inst/msdir/dist3.c

inst/msdir/ms.c

inst/msdir/streec.c

inst/msdir/tajd.c

inst/msdir/corresp_about_license.pdf

inst/msdir/microsat.c

inst/extdata/sim.E.003.small/sim.E.003.small.xml

inst/extdata/sim.E.003.small/gene3.trees

inst/extdata/sim.E.003.small/gene7.trees

inst/extdata/sim.E.003.small/gene9.trees

inst/extdata/sim.E.003.small/gene8.trees

inst/extdata/sim.E.003.small/species.trees

inst/extdata/sim.E.003.small/gene2.trees

inst/extdata/sim.E.003.small/gene4.trees

inst/extdata/sim.E.003.small/gene5.trees

inst/extdata/sim.E.003.small/gene6.trees

inst/extdata/sim.E.003.small/gene1.trees

inst/extdata/sim.E.003.small/gene10.trees

vignettes/P2C2M_Vignette.Rnw

vignettes/P2C2M_Vignette.bib

exec/BEAST2phybase_1.8.py

exec/P2C2M.installRlibs.R

exec/parseBEAUTiXML_1.7.py

exec/parseBEAUTiXML_1.8.py

exec/P2C2M.installPylibs.py

exec/BEAST2phybase_1.7.py

R/readhelpers.formatmeta.R R/statshelpers.cv.R R/readtree.phybase.R R/calc.lcwt.R R/calc.parse.R R/stats.main.R R/sourceDir.R R/corehelpers.metrics.R R/rowMedians.R R/stats.coord.R R/calchelpers.probcalc.R R/p2c2m.analyze.R R/rowModes.R R/frmtMntse.R R/ms.exec.R R/stats.acrGenes.R R/statshelpers.diffrnce.R R/readtree.gtree.R R/p2c2m.complete.R R/is.integer0.R R/calchelpers.descend.R R/readhelpers.parsetrees.R R/statshelpers.qntls.R R/calc.gsi.R R/P2C2M-internal.R R/p2c2m.readstarb.R R/calchelpers.gtreeparse.R R/calchelpers.nodetips.R R/stats.perGene.R R/readhelpers.makeCFtable.R R/rmOutlrs.R R/Mode.R R/rmext.R R/readtree.stree.R R/is.character0.R R/calchelpers.dmvparse.R R/str2lst.R R/rtnlc.R R/loghelpers.prntmngr.R R/readhelpers.extract_br_and_meta.R R/calc.ndc.R R/calchelpers.brprob.R R/calc.coal.R R/statshelpers.sigsgn.R man/viz_example.2.Rd man/p2c2m.complete.Rd man/sim.E.003.small.Rd man/P2C2M-package.Rd man/viz_example.1.Rd

build/vignette.rds

data/sim.E.003.small.rda

data/viz_example_1.rda

data/viz_example_2.rda

P2C2M documentation built on May 2, 2019, 8:24 a.m.