PAMhm: Generate Heatmaps Based on Partioning Around Medoids (PAM)
In PAMhm: Generate Heatmaps Based on Partitioning Around Medoids (PAM)
Description
Data are partitioned (clustered) into k clusters "around medoids", which is
a more robust version of K-means implemented in the function pam() in the 'cluster' package.
The PAM algorithm is described in Kaufman and Rousseeuw (1990) <doi:10.1002/9780470316801>.
Please refer to the pam() function documentation for more references.
Clustered data is plotted as a split heatmap allowing visualisation of representative
"group-clusters" (medoids) in the data as separated fractions of the graph while those
"sub-clusters" are visualised as a traditional heatmap based on hierarchical clustering.
Details
Package: PAMhm
Type: Package
Initial version: 0.1-0
Created: 2011-01-07
License: GPL-3
LazyLoad: yes
Author(s)
Vidal Fey <vidal.fey@gmail.com>, Henri Sara <henri.sara@gmail.com>
Maintainer: Vidal Fey <vidal.fey@gmail.com>
PAMhm documentation built on Sept. 6, 2021, 9:10 a.m.
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Description
Data are partitioned (clustered) into k clusters "around medoids", which is a more robust version of K-means implemented in the function pam() in the 'cluster' package. The PAM algorithm is described in Kaufman and Rousseeuw (1990) <doi:10.1002/9780470316801>. Please refer to the pam() function documentation for more references. Clustered data is plotted as a split heatmap allowing visualisation of representative "group-clusters" (medoids) in the data as separated fractions of the graph while those "sub-clusters" are visualised as a traditional heatmap based on hierarchical clustering.
Details
| Package: | PAMhm |
| Type: | Package |
| Initial version: | 0.1-0 |
| Created: | 2011-01-07 |
| License: | GPL-3 |
| LazyLoad: | yes |
Author(s)
Vidal Fey <vidal.fey@gmail.com>, Henri Sara <henri.sara@gmail.com> Maintainer: Vidal Fey <vidal.fey@gmail.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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