This package provides the necessary functions for performing the Partial Correlation coefficient with Information Theory (PCIT) algorithm developed by Reverter and Chan (2008). The PCIT algorithm identifies meaningful correlations to define edges in a weighted network.

The algorithm can be applied to any correlation-based network including but not limited to gene co-expression networks.

Package: | PCIT |

Type: | Package |

Version: | 1.04-3 |

Date: | 2011-05-11 |

License: | GPL-3 |

LazyLoad: | yes |

Nathan S. Watson-Haigh Maintainer: Nathan S. Watson-Haigh <nathan.watson-haigh@awri.com.au>

A. Reverter and E.K.F. Chan. (2008) Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks. Bioinformatics. **24**(21), 2491-2497.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.