exmplData2: Example dataset 2
In PEIMAN2: Post-Translational Modification Enrichment, Integration, and Matching Analysis
exmplData2 R Documentation
Example dataset 2
Description
A test dataset of proteins identified from rat hippocampus
proteome using label-free thermal proteome profiling. The score for each
protein corresponds to the SEQUEST HT engine score of one arbitrary
peptide-spectrum match (PSM) associated with that protein. This dataset is
provided to demonstrate how a ranked list of proteins can be used within the
PEIMAN2 package.
Usage
exmplData2
Format
A data frame with 209 rows and 2 columns:
- UniProtAC
UniProt accession code of proteins
- Score
SEQUEST HT score of one associated PSM (used for demonstration purposes)
...
Details
Proteins of rat hippocampus proteome.
Source
PEIMAN2 documentation built on June 8, 2025, 1:03 p.m.
R Package Documentation
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| exmplData2 | R Documentation |
Example dataset 2
Description
A test dataset of proteins identified from rat hippocampus proteome using label-free thermal proteome profiling. The score for each protein corresponds to the SEQUEST HT engine score of one arbitrary peptide-spectrum match (PSM) associated with that protein. This dataset is provided to demonstrate how a ranked list of proteins can be used within the PEIMAN2 package.
Usage
exmplData2
Format
A data frame with 209 rows and 2 columns:
- UniProtAC
UniProt accession code of proteins
- Score
SEQUEST HT score of one associated PSM (used for demonstration purposes)
...
Details
Proteins of rat hippocampus proteome.
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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