Man pages for POMS
Phylogenetic Organization of Metagenomic Signals
| abun_isometric_log_ratios | Compute isometric log ratio based on abundance of feature... |
| compute_node_balances | Compute balances at tree nodes. |
| filter_rare_table_cols | Filters out columns of dataframe based on number of... |
| genome_content_phylo_regress | Phylogenetic regression of input vector against function... |
| node_taxa | Determine taxa labels of tips on each side of a node |
| phylolm_summary | Wrapper for running phylogenetic regression with phylolm |
| POMS_pipeline | Main function to run POMS pipeline |
| prep_func_node_info | Get node indices of FSN and BSN categories across tree for a... |
| prevalence_norm_logit | Compute additive smoothed prevalence of features (e.g, taxa),... |
| specificity_scores | Compute shrunken specificity score of a feature, which... |
| subset_by_col_and_filt | Subset dataframe by column names and then post-filter |
