PlotMMig: Plot Multiple Migrations

In POPdemog: Plot Population Demographic History

Description

This function is used to plot all the migration events based on the output of PlotMS with plot.out = FALSE and demo.out = TRUE. Plot settings should be customized in PlotMS. Use function PlotMig to customize the plot of single migration.

Usage

PlotMMig(demograph_out, mig_par, m.adjust = 0)

Arguments

demograph_out	A list of all demographic information. See the return value description of PlotMS.
mig_par	A list of all settings for plotting the demographic graph. See the return value description of PlotMS.
m.adjust	Migration threshold for plotting migration events. Migration events with strength higher than m.adjust will be shown. The migration strength is defined as the proportion of the target population being replaced by the source population per generation. Default value is 0.

See Also

PlotMS

Examples

mig.cmd <- "./ms 15 100 -t 3.0 -I 6 0 7 0 0 8 0 -m 1 2 2.5 -m 2 1 2.5 -m 2 3 2.5 
-m 3 2 2.5 -m 4 5 2.5 -m 5 4 2.5 -m 5 6 2.5 -m 6 5 2.5 -em 2.0 3 4 2.5 
-em 2.0 4 3 2.5"
out<-PlotMS(input.cmd = mig.cmd, type = "ms", N4 = 10000, 
plot.out = FALSE, demo.out = TRUE, col.pop = 1:6, cex.lab = 1.5);
PlotMMig(demograph_out = out$demograph_out, mig_par = out$mig_par)

POPdemog documentation built on May 2, 2019, 8:18 a.m.