print: Print the Primary Results of a post() Analysis

In POSTm: Phylogeny-Guided OTU-Specific Association Test for Microbiome Data

Print the Primary Results of a post() Analysis

Description

Print the primary results of a post() analysis.

Usage

## S3 method for class 'POST'
print(x, ..., siglevel = 1)

Arguments

x	A POST object. The value object returned by a call to post()
...	Further arguments passed to or from other methods
siglevel	A numeric object. If < 1, shows only the OTUs for which the p-value is below the specified siglevel.

Value

No return value, called to display key results.

Examples

data("POSTmData")

y <- as.integer(x = metadata[,"GC"] == "BV")
X <- metadata[,"mRace"]

result <- post(y = y, 
               X = X, 
               OTU = otu[,1:20], 
               tree = otutree,
               cValues = seq(0,0.05,by=0.01))

print(x = result)

POSTm documentation built on May 29, 2024, 9:24 a.m.