combinedCOPDdat_RGO: Chronic Obstructive Pulmonary Disease (COPD) data

In PRANA: Pseudo-Value Regression Approach for Network Analysis (PRANA)

Chronic Obstructive Pulmonary Disease (COPD) data

Description

A subset of the COPDGene study data, obtained from the Gene Expression Omnibus database. This contains expression and clinical covariates data. All of the 28 genes contained in this data are identified as COPD-related by Sakornsakolpat et al. Nat Genet, 2019.

Usage

data(combinedCOPDdat_RGO)

Format

combinedCOPDdat_RGO

References

Sakornsakolpat P, Prokopenko D, Lamontagne M, et al. Genetic landscape of chronic obstructive pulmonary disease identifies heterogeneous cell-type and phenotype associations. Nat Genet. 2019;51(3):494–505. (PubMed) Ahn S, Grimes T, Datta S. A pseudo-value regression approach for differential network analysis of co-expression data. BMC Bioinformatics, 2023;24(1):8. (PubMed)

Examples

data(combinedCOPDdat_RGO)
combinedCOPDdat_RGO

PRANA documentation built on Sept. 30, 2024, 9:25 a.m.