PUMP
Power Under Multiplicity Project

Package index
Search the PUMP package
Vignettes
Functions
180
Source code
46
Man pages
65
Home
/
CRAN
/
PUMP: Power Under Multiplicity Project
/
Files

Files in PUMP
Power Under Multiplicity Project

MD5
README.md
NAMESPACE
DESCRIPTION
R/correlation.R R/model_fitting.R R/simulation.R R/PUMP-package.R R/pump_wy.R R/optimize_power.R R/pump_mdes.R R/util.R R/pumpgridresult.R R/designs_and_models.R R/plots.R R/pump_sample.R R/grid_functions.R R/pump_power.R R/pumpresult.R
inst/CITATION
inst/doc/pump_simulate.html
inst/doc/pump_simulate.Rmd
inst/doc/pump_demo.html
inst/doc/pump_sample_demo.R
inst/doc/pump_sample_demo.html
inst/doc/pump_demo.Rmd inst/doc/pump_demo.R inst/doc/pump_sample_demo.Rmd inst/doc/pump_simulate.R
build/vignette.rds
build/partial.rdb
tests/testthat.R tests/auxiliary/test-pump_wy_out.R tests/auxiliary/test-pump_multtest.R tests/testthat/test-power_def.R tests/testthat/test-validation_check.R tests/testthat/test-optimize_power.R tests/testthat/test-M1-calls.R tests/testthat/test-grid_functions.R tests/testthat/test-power_levels.R tests/testthat/test-update_functions.R tests/testthat/test-cor.R tests/testthat/test-plots.R tests/testthat/test-designs_three.R tests/testthat/test-pump_sample.R tests/testthat/test-pump_wy_base.R tests/testthat/test-powerup.R tests/testthat/test-numZero_parameter.R tests/testthat/Rplots.pdf tests/testthat/test-designs_two.R tests/testthat/test-util.R tests/testthat/test-calc_SE_and_df.R tests/testthat/test-porter-benchmark.R tests/testthat/test-simulation.R tests/testthat/test-pump_mdes.R tests/testthat/helper-functions.R tests/testthat/test-sim-gen.R tests/testthat/test-pump_power.R tests/testthat/test-pumpgridresult.R tests/testthat/test-pumpresult.R vignettes/pump_simulate.Rmd vignettes/pump_demo.Rmd
vignettes/refs.bib
vignettes/pump_sample_demo.Rmd
vignettes/pump_demo_files/figure-html/unnamed-chunk-8-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-6-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-3-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-2-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-13-1.png
vignettes/pump_demo_files/figure-html/numzerogrid-compile-1.png
vignettes/pump_demo_files/figure-html/plotsamplepowercurve-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-5-1.png
vignettes/pump_demo_files/figure-html/unnamed-chunk-7-1.png
vignettes/pump_demo_files/figure-html/ICCgrid-compile-1.png
vignettes/pump_demo_files/figure-html/othercorrections-compile-1.png
vignettes/pump_demo_files/figure-latex/unnamed-chunk-7-1.pdf vignettes/pump_demo_files/figure-latex/unnamed-chunk-6-1.pdf vignettes/pump_demo_files/figure-latex/unnamed-chunk-8-1.pdf vignettes/pump_demo_files/figure-latex/unnamed-chunk-13-1.pdf
vignettes/output/ICCgrid.RDS
vignettes/output/MDEScalcmin1.RDS
vignettes/output/powbase.RDS
vignettes/output/numzerogrid.RDS
vignettes/output/othercorrections.RDS
vignettes/output/powR2.RDS
vignettes/output/MDESwithNumZero.RDS
vignettes/output/powICC.RDS
vignettes/output/rhogrid.RDS
vignettes/output/samplesizeverify.RDS
vignettes/output/samplesizecalc.RDS
vignettes/output/MDEScalc.RDS
vignettes/pump_demo_cache/html/MDEScalc_dd0f7f83c5617e57d656542e712adb58.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-16_9f774c16209787ec17ecf78c5301984b.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-3_4f3703794e5fa06c14e914b1c3beb112.RData
vignettes/pump_demo_cache/html/othercorrections_df9efdfa30c0f29eaf72687cf18c4de5.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-9_47ef815221134a7e283a1a42f93ad63f.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-1_8c33cd2f1f99b3033f8498d557f85500.rdb
vignettes/pump_demo_cache/html/othercorrections_df9efdfa30c0f29eaf72687cf18c4de5.RData
vignettes/pump_demo_cache/html/unnamed-chunk-5_c90bc4b66da9ca274c0f641af1eb5a76.RData
vignettes/pump_demo_cache/html/setup_bd88adb6cbd6d7aba741356d29cfbc87.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-12_55091f38a326ef2834ec6d04d3b314d2.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-9_47ef815221134a7e283a1a42f93ad63f.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-4_5b60aa6634f14b2d7ffd746b5ca02b77.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-17_6669be4f8310ce3294cadfe33b030d3e.RData
vignettes/pump_demo_cache/html/unnamed-chunk-1_8c33cd2f1f99b3033f8498d557f85500.RData
vignettes/pump_demo_cache/html/unnamed-chunk-8_1232127322b42b7b20bc9b31edd82816.RData
vignettes/pump_demo_cache/html/samplesizecalc_bb827ff04f45a0169a366551d534f27d.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-5_c90bc4b66da9ca274c0f641af1eb5a76.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-15_ca62c545cffa434d668f805dfb34cd23.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-8_1232127322b42b7b20bc9b31edd82816.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-1_8c33cd2f1f99b3033f8498d557f85500.rdx
vignettes/pump_demo_cache/html/samplesizeverify_4b2fb87d8fe8d4e13024719ba252652b.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-16_9f774c16209787ec17ecf78c5301984b.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-5_c90bc4b66da9ca274c0f641af1eb5a76.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-6_af9dbd44ff30b68bb77190da3767a204.rdb
vignettes/pump_demo_cache/html/samplesizeverify_4b2fb87d8fe8d4e13024719ba252652b.rdx
vignettes/pump_demo_cache/html/samplesizecalc_bb827ff04f45a0169a366551d534f27d.rdb
vignettes/pump_demo_cache/html/MDEScalcmin1_71202bf53db28386cd882b71263f7c96.RData
vignettes/pump_demo_cache/html/unnamed-chunk-2_ddad74c2643540922d7ce4d62ba020c2.RData
vignettes/pump_demo_cache/html/unnamed-chunk-3_4f3703794e5fa06c14e914b1c3beb112.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-7_6fc4d2b27f97fa8f9f46b0641fab2701.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-10_52313323db4158d63dbb67356bcaf9d8.rdx
vignettes/pump_demo_cache/html/samplesizeverify_4b2fb87d8fe8d4e13024719ba252652b.RData
vignettes/pump_demo_cache/html/unnamed-chunk-10_52313323db4158d63dbb67356bcaf9d8.RData
vignettes/pump_demo_cache/html/unnamed-chunk-12_55091f38a326ef2834ec6d04d3b314d2.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-2_ddad74c2643540922d7ce4d62ba020c2.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-14_db3cf3c3d56b7d44c9dbee231d3bb9d3.rdx
vignettes/pump_demo_cache/html/MDEScalcmin1_71202bf53db28386cd882b71263f7c96.rdb
vignettes/pump_demo_cache/html/MDEScalcmin1_71202bf53db28386cd882b71263f7c96.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-6_af9dbd44ff30b68bb77190da3767a204.RData
vignettes/pump_demo_cache/html/unnamed-chunk-7_6fc4d2b27f97fa8f9f46b0641fab2701.rdb
vignettes/pump_demo_cache/html/__packages
vignettes/pump_demo_cache/html/unnamed-chunk-11_aa6c69e0fa3b6ed01b16a11c0cc614fa.RData
vignettes/pump_demo_cache/html/unnamed-chunk-8_1232127322b42b7b20bc9b31edd82816.rdx
vignettes/pump_demo_cache/html/othercorrections_df9efdfa30c0f29eaf72687cf18c4de5.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-10_52313323db4158d63dbb67356bcaf9d8.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-15_ca62c545cffa434d668f805dfb34cd23.RData
vignettes/pump_demo_cache/html/unnamed-chunk-12_55091f38a326ef2834ec6d04d3b314d2.RData
vignettes/pump_demo_cache/html/unnamed-chunk-13_6a0e54208981d0a02ec24a78ac676575.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-17_6669be4f8310ce3294cadfe33b030d3e.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-11_aa6c69e0fa3b6ed01b16a11c0cc614fa.rdx
vignettes/pump_demo_cache/html/unnamed-chunk-11_aa6c69e0fa3b6ed01b16a11c0cc614fa.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-4_5b60aa6634f14b2d7ffd746b5ca02b77.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-9_47ef815221134a7e283a1a42f93ad63f.RData
vignettes/pump_demo_cache/html/MDEScalc_dd0f7f83c5617e57d656542e712adb58.rdx
vignettes/pump_demo_cache/html/samplesizecalc_bb827ff04f45a0169a366551d534f27d.RData
vignettes/pump_demo_cache/html/unnamed-chunk-14_db3cf3c3d56b7d44c9dbee231d3bb9d3.RData
vignettes/pump_demo_cache/html/unnamed-chunk-13_6a0e54208981d0a02ec24a78ac676575.RData
vignettes/pump_demo_cache/html/unnamed-chunk-15_ca62c545cffa434d668f805dfb34cd23.rdb
vignettes/pump_demo_cache/html/setup_bd88adb6cbd6d7aba741356d29cfbc87.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-2_ddad74c2643540922d7ce4d62ba020c2.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-6_af9dbd44ff30b68bb77190da3767a204.rdx
vignettes/pump_demo_cache/html/setup_bd88adb6cbd6d7aba741356d29cfbc87.RData
vignettes/pump_demo_cache/html/unnamed-chunk-3_4f3703794e5fa06c14e914b1c3beb112.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-7_6fc4d2b27f97fa8f9f46b0641fab2701.RData
vignettes/pump_demo_cache/html/unnamed-chunk-13_6a0e54208981d0a02ec24a78ac676575.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-14_db3cf3c3d56b7d44c9dbee231d3bb9d3.rdb
vignettes/pump_demo_cache/html/unnamed-chunk-16_9f774c16209787ec17ecf78c5301984b.RData
vignettes/pump_demo_cache/html/unnamed-chunk-4_5b60aa6634f14b2d7ffd746b5ca02b77.RData
vignettes/pump_demo_cache/html/MDEScalc_dd0f7f83c5617e57d656542e712adb58.RData
vignettes/pump_demo_cache/html/unnamed-chunk-17_6669be4f8310ce3294cadfe33b030d3e.rdb
man/transpose_power_table.Rd man/adjp_wyss.Rd man/gen_cluster_ids.Rd man/calc_J.Rd man/update_grid.Rd man/run_grid.Rd man/fit_bounded_logistic.Rd man/get_rawpt.Rd man/validate_d_m.Rd man/gen_cov_matrix.Rd man/power_curve.Rd man/interacted_linear_estimators.Rd man/calc_pval.Rd man/get_adjp_minp.Rd man/get_pval_tstat.Rd man/make_model.Rd man/gen_Yobs.Rd man/comp_rawp_ss.Rd man/calc_K.Rd man/pump_power_exact.Rd man/estimate_power_curve.Rd man/PUMP-package.Rd man/pump_sample_raw.Rd man/calc_nbar.Rd man/plot.pumpresult.Rd man/gen_T.x.Rd man/strip_SEs.Rd man/plot.pumpgridresult.power.Rd man/check_cor.Rd man/convert_params.Rd man/update.pumpresult.Rd man/validate_inputs.Rd man/calc_df.Rd man/pumpgridresult.Rd man/makelist_samp.Rd man/plot.pumpgridresult.mdes.Rd man/calc_MT.Rd man/pump_mdes.Rd man/get_power_results.Rd man/adjp_wysd.Rd man/pump_sample_grid.Rd man/pump_info.Rd man/print_search.Rd man/plot.pumpgridresult.Rd man/parse_d_m.Rd man/setup_default_parallel_plan.Rd man/plot_power_curve.Rd man/calc_SE.Rd man/print_context.Rd man/plot.pumpgridresult.sample.Rd man/pump_power.Rd man/find_best.Rd man/comp_rawp_sd.Rd man/pump_power_grid.Rd man/update.pumpgridresult.Rd man/parse_power_definition.Rd man/plot_power_search.Rd man/pumpresult.Rd man/optimize_power.Rd man/gen_RE_cov_matrix.Rd man/gen_base_sim_data.Rd man/pump_mdes_grid.Rd man/pump_sample.Rd man/gen_sim_data.Rd man/gen_corr_matrix.Rd
man/figures/pump_icon.png
PUMP documentation built on April 4, 2025, 5:19 a.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close