example_pathofm_features: Construct a synthetic feature vector for examples and smoke...

In PathoFMPred: Tumour Feature Models from Pathology Representations

Construct a synthetic feature vector for examples and smoke tests

Description

The vector is the across-model mean of stored training-feature means for the requested cancer and is not a patient record.

Usage

example_pathofm_features(
  cancer = "COAD",
  foundation_model = "ProvGigaPath",
  include_limited_evidence = FALSE
)

example_titan_features(cancer = "BRCA", include_limited_evidence = FALSE)

Arguments

cancer	A cancer code with locally installed models.
foundation_model	One of 'TITAN', 'GigaSSL', or 'ProvGigaPath'.
include_limited_evidence	Use limited-evidence models when constructing the synthetic across-model feature mean. The default is 'FALSE'.

Value

A one-row data frame containing the named features required by the selected representation.

PathoFMPred documentation built on Nov. 12, 2026, 5:10 p.m.