PeakErrorChrom: PeakErrorChrom

In PeakError: Compute the Label Error of Peak Calls

PeakErrorChrom

Description

Compute the PeakError assuming that peaks and regions are on the same chrom.

Usage

PeakErrorChrom(peaks, 
    regions)

Arguments

peaks	data.frame with columns chromStart, chromEnd. NOTE: chromStart should be 0-based and chromEnd should be 1-based. EXAMPLE: the first 100 base of of a chromosome are chromStart=0, chromEnd=100. The second 100 bases are chromStart=100, chromEnd=200.
regions	data.frame with columns chromStart, chromEnd.

Value

data.frame with 1 row for each region and error columns.

Author(s)

Toby Dylan Hocking

PeakError documentation built on Sept. 8, 2023, 5:32 p.m.