Man pages for PeakSegDP
Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data

calc.grad.listcalc grad list
calc.loss.from.lp.listcalc loss from lp list
calc.loss.listcalc loss list
cDPAcDPA
chr11ChIPseqChIP-seq aligned read coverage for 4 samples on a subset of...
chr11firstCounts of first base of aligned reads
derivsderivs
GeomTallRectGeomTallRect
getPathgetPath
H3K36me3.AM.immune.19Several ChIP-seq profiles, some of which have few data points
H3K36me3.TDH.other.chunk3.cluster48 profiles of H3K36me3 data
H3K4me3.TDH.immune.chunk12.cluster4Histone ChIP-seq data, 26 samples, chr1 subset
PeakSegDPPeakSegDP
phi.listphi list
PoissonLossPoissonLoss
regression.funsregression funs
PeakSegDP documentation built on Aug. 16, 2017, 1:02 a.m.