Man pages for PeakSegDisk
Disk-Based Constrained Change-Point Detection
| ChIPreads | Reads aligned to hg19 from two ChIP-seq experiments |
| coef.PeakSegFPOP_df | coef PeakSegFPOP df |
| coef.PeakSegFPOP_dir | coef PeakSegFPOP dir |
| col.name.list | col name list |
| fread.first | Quickly read first line |
| fread.last | Quickly read last line |
| Mono27ac | A small ChIP-seq data set in which peaks can be found using... |
| PeakSegFPOP_df | PeakSeg penalized solver for data.frame |
| PeakSegFPOP_dir | PeakSeg penalized solver with caching |
| PeakSegFPOP_file | PeakSegFPOP using disk storage |
| PeakSegFPOP_vec | PeakSeg penalized solver for integer vector |
| plot.PeakSegFPOP_df | plot PeakSegFPOP df |
| plot.PeakSegFPOP_dir | plot PeakSegFPOP dir |
| sequentialSearch_dir | Compute PeakSeg model with given number of peaks |
| summary.PeakSegFPOP_dir | summary PeakSegFPOP dir |
| wc2int | wc2int |
| writeBedGraph | Write bedGraph file |
