Man pages for PopGenKit
Useful functions for (batch) file conversion and data resampling in microsatellite datasets
| batchconvert | Convert all Genepop files in dir to Arlequin format |
| batchconvertjack | Convert all Genepop files in dir to Arlequin format while... |
| batchjacklociArp | Remove a subset of loci from all Arlequin project files... |
| batchjacklociArpRANDOM | Remove a random subset of loci from all Arlequin project... |
| batchrecodeBi | Transform all multi-allelic Arlequin datafiles in dir to... |
| bootstrapHet | Calculate confidence intervals on observed and expected... |
| bootstrapHet_byloc | Calculate confidence intervals on observed and expected... |
| combineBsim | Combines real and simulated multilocus data (from the... |
| convert | Convert a Genepop file to Arlequin format |
| convertjack | Convert a Genepop file to Arlequin format while allowing the... |
| freqPCA | Create a table of allele frequencies from Arlequin file... |
| inputBottleSim | Create a BottleSim input file from a Genepop (.gen) file. |
| jacklociArp | Remove a subset of loci from a Arlequin project file... |
| jacklociArpRANDOM | Remove a random subset of loci from a Arlequin project file... |
| jackmsat | An internal function used by 'jackmsatpop'. Should not be... |
| jackmsatpop | From a Genepop input file (.gen), it calculates allele... |
| outputBottleSim | Converts alleles from BottleSim simulation results to real... |
| PICalc | Compute the polymorphism infomration content (PIC) of each... |
| popgen | Compute allele frequencies, population genetic parameters,... |
| PopGenKit-package | Useful functions for (batch) file conversion and data... |
| recodeBi | Transform a multi-allelic Arlequin datafile to a bi-allelic... |
