igm.read.data: Read sample file and genotype collapsing matrix in IGM...
In QQperm: Permutation Based QQ Plot and Inflation Factor Estimation
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Read sample file and genotype collapsing matrix in IGM (Insitute for Genomic Medicine, Columbia University) format.
Usage
1
igm.read.data(sample.file, matrix.file, filter.list = NULL)
Arguments
sample.file
The input sample file.
matrix.file
The input matrix file.
filter.list
An optional list of genes to exclude from the analysis.
Value
Returns a list containing the data matrix (matrix) and case(1)/control(0) phenotype indicators (is.case).
Author(s)
Slave Petrovski and Quanli Wang
Examples
1
#igm.data <- igm.read.data(sample.file, matrix.file)
QQperm documentation built on May 2, 2019, 5:52 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Read sample file and genotype collapsing matrix in IGM (Insitute for Genomic Medicine, Columbia University) format.
Usage
1 | igm.read.data(sample.file, matrix.file, filter.list = NULL)
|
Arguments
sample.file |
The input sample file. |
matrix.file |
The input matrix file. |
filter.list |
An optional list of genes to exclude from the analysis. |
Value
Returns a list containing the data matrix (matrix) and case(1)/control(0) phenotype indicators (is.case).
Author(s)
Slave Petrovski and Quanli Wang
Examples
1 | #igm.data <- igm.read.data(sample.file, matrix.file)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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