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Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with 'QL', 'QLShrink' and 'QLSpline' methods described by Lund, Nettleton, McCarthy, and Smyth (2012) <DOI:10.1515/1544-6115.1826>. Report bias-reduced estimates of log fold changes.
Package details |
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Author | Steve Lund [aut, cre], Long Qu [aut, ctb], Klirk Bhasavanich [aut], Ian Marschner [aut] (The author of glm2::glm.fit2, which was modified slightly leading to glm.fit3 in this package.), R Core Team [aut] (The author of stats::glm.fit, which was modified slightly leading to glm.fit3 in this package.) |
Maintainer | Steve Lund <lundsp@gmail.com> |
License | GPL (>= 2) |
Version | 1.0-11-0 |
Package repository | View on CRAN |
Installation |
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