QuasiSeq: Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
Version 1.0-10-1

Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with 'QL', 'QLShrink' and 'QLSpline' methods described by Lund, Nettleton, McCarthy, and Smyth (2012) . Report bias-reduced estimates of log fold changes.

Getting started

Package details

AuthorSteve Lund [aut], Long Qu [aut, cre, ctb], Klirk Bhasavanich [aut], Ian Marschner [aut] (The author of glm2::glm.fit2, which was modified slightly leading to glm.fit3 in this package.), R Core Team [aut] (The author of stats::glm.fit, which was modified slightly leading to glm.fit3 in this package.)
Date of publication2017-07-09 20:55:02 UTC
MaintainerLong Qu <[email protected]>
LicenseGPL (>= 2)
Version1.0-10-1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("QuasiSeq")

Try the QuasiSeq package in your browser

Any scripts or data that you put into this service are public.

QuasiSeq documentation built on July 10, 2017, 1:05 a.m.