QuasiSeq: Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
Version 1.0-10-2

Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with 'QL', 'QLShrink' and 'QLSpline' methods described by Lund, Nettleton, McCarthy, and Smyth (2012) . Report bias-reduced estimates of log fold changes.

Getting started

Package details

AuthorSteve Lund [aut, cre], Long Qu [aut, ctb], Klirk Bhasavanich [aut], Ian Marschner [aut] (The author of glm2::glm.fit2, which was modified slightly leading to glm.fit3 in this package.), R Core Team [aut] (The author of stats::glm.fit, which was modified slightly leading to glm.fit3 in this package.)
Date of publication2018-05-10 21:32:13 UTC
MaintainerSteve Lund <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on CRAN
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QuasiSeq documentation built on May 11, 2018, 1:04 a.m.