biosensor.eq: Internal function used to fit a biosensor response model with...

In QurvE: Robust and User-Friendly Analysis of Growth and Fluorescence Curves

Internal function used to fit a biosensor response model with nlsLM

Description

Calculates the values of biosensor response model for given time points and response parameters.

Usage

biosensor.eq(x, y.min, y.max, K, n)

Arguments

x	A vector of concentration values
y.min	The minimum fluorescence value
y.max	The maximum fluorescence value
K	Sensitivity parameter
n	Cooperativity parameter

Value

A vector of fluorescence values

References

Meyer, A.J., Segall-Shapiro, T.H., Glassey, E. et al. Escherichia coli “Marionette” strains with 12 highly optimized small-molecule sensors. Nat Chem Biol 15, 196–204 (2019). DOI: 10.1038/s41589-018-0168-3

Examples

n <- seq(1:10)
conc <- rev(10*(1/2)^n)
fit <- biosensor.eq(conc, 300, 82000, 0.85, 2)

QurvE documentation built on May 29, 2024, 3 a.m.