multimarray: Multistate m-array
In R2ucare: Goodness-of-Fit Tests for Capture-Recapture Models

multimarray

R Documentation

Multistate m-array

Description

This function calculates the m-array for multistate capture-recapture data, the number of released and never seen again individuals.

Usage

multimarray(X, freq)

Arguments

`X`	a matrix of encounter histories over K occasions
`freq`	is a vector with the number of individuals having the corresponding encounter history

Value

This function returns a matrix in which R the number of released individuals is in the first column, the number of individuals never recaptured (K-1) is in the last column and m the m-array (K-1 x K-1) with upper triangle filled only is in sandwich between these two vectors.

Author(s)

Olivier Gimenez <olivier.gimenez@cefe.cnrs.fr>,Jean-Dominique Lebreton, Rémi Choquet, Roger Pradel

Examples

# Read in Geese dataset:
geese = system.file("extdata", "geese.inp", package = "R2ucare")
geese = read_inp(geese)

# Get encounter histories and number of individuals with corresponding histories
geese.hist = geese$encounter_histories
geese.freq = geese$sample_size

# build m-array
multimarray(geese.hist, geese.freq)

R2ucare documentation built on July 11, 2022, 9:06 a.m.