| gforest | R Documentation |
Draws estimates and confidence intervals on a linear or logarithmic scale. It is suitable for odds ratios, risk ratios, prevalence ratios, hazard ratios, and regression coefficients.
gforest(
data = NULL,
estimate,
lower,
upper,
label,
reference = 1,
log = TRUE,
sort = FALSE,
digits = 2,
xtitle = NULL,
title = NULL,
subtitle = NULL,
note = NULL,
color = NULL,
palette = "journal",
point_size = 1.1,
line_width = 2,
reference_color = "gray50",
reference_lty = 2,
reference_lwd = 1,
theme = "journal",
size = 11,
file = NULL,
width = 7,
height = 5,
dpi = 300,
show = TRUE,
bg = "white"
)
data |
A data frame. |
estimate |
Point estimate variable. |
lower, upper |
Lower and upper confidence-limit variables. |
label |
Row-label variable. |
reference |
Reference value, commonly 1 for ratios and 0 for coefficients. |
log |
Use a logarithmic horizontal axis. |
sort |
Sort by estimate: |
digits |
Number of displayed digits. |
xtitle |
Horizontal-axis title. |
title, subtitle, note |
Main title, subtitle, and note. |
color |
Point and interval color. |
palette |
Color palette used when |
point_size |
Point-size multiplier. |
line_width |
Confidence-interval line width. |
reference_color, reference_lty, reference_lwd |
Color, line type, and width of the vertical reference line. |
theme, size, file, width, height, dpi, show, bg |
See |
An object of class r4vn_graph; its data component contains plotted rows.
d <- data.frame(
term = c("Smoking", "Obesity", "Male"),
or = c(1.8, 2.4, 1.2),
lower = c(1.2, 1.5, 0.8),
upper = c(2.7, 3.8, 1.8)
)
gforest(d, estimate = or, lower = lower, upper = upper, label = term)
# Extended usage examples
# Ratio measures use reference = 1 and a logarithmic axis
d <- data.frame(
term = c("Smoking", "Obesity", "Male"),
estimate = c(1.80, 2.40, 1.20),
lower = c(1.20, 1.50, 0.80),
upper = c(2.70, 3.80, 1.80)
)
gforest(d, estimate, lower, upper, term, show = FALSE)
gforest(d, estimate, lower, upper, term,
sort = "descending", title = "Adjusted odds ratios", show = FALSE)
# Regression coefficients use reference = 0 and a linear axis
beta <- data.frame(term = c("Age", "BMI", "Male"),
estimate = c(0.12, 0.34, -0.18),
lower = c(0.04, 0.10, -0.45),
upper = c(0.20, 0.58, 0.09))
gforest(beta, estimate, lower, upper, term,
reference = 0, log = FALSE, xtitle = "Regression coefficient",
show = FALSE)
# Export directly to a graphics file
gforest(d, estimate, lower, upper, term,
file = tempfile(fileext = ".png"), show = FALSE)
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