RFGLS: Rapid Feasible Generalized Least Squares

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RFGLS uses a generalized least-squares method to perform single-marker association analysis, in datasets of nuclear families containing parents, twins, and/or adoptees

Author
Robert M. Kirkpatrick <rkirkpatrick2@vcu.edu>, Xiang Li <lixxx554@umn.edu>, and Saonli Basu <saonli@umn.edu>.
Date of publication
2013-09-03 19:29:45
Maintainer
Saonli Basu <saonli@umn.edu>
License
GPL (>= 2)
Version
1.1

View on CRAN

Man pages

fgls
Feasible Generalized Least Squares regression with family...
FSV_frompedi
Family-Structure Variables from Pedigree File
geno
Simulated genotypic dataset
gls.batch
Generalized least-squares batch analysis.
gls.batch.get
Data restructuring for 'fgls()'.
map
SNP "map" file
pedigree
Pedigree table
pheno
Simulated quantitative-trait dataset
rescovmtx
Residual variance-covariance matrix.
RFGLS-package
Rapid Feasible Generalized Least Squares

Files in this package

RFGLS
RFGLS/NAMESPACE
RFGLS/data
RFGLS/data/rescovmtx.rda
RFGLS/data/pedigree.rda
RFGLS/data/map.rda
RFGLS/data/geno.rda
RFGLS/data/pheno.rda
RFGLS/R
RFGLS/R/gls.batch.r
RFGLS/R/FSV_frompedi.R
RFGLS/R/fgls.R
RFGLS/R/gls.batch.get.r
RFGLS/R/getblocks.r
RFGLS/R/gwasfunc.R
RFGLS/MD5
RFGLS/DESCRIPTION
RFGLS/man
RFGLS/man/pheno.Rd
RFGLS/man/map.Rd
RFGLS/man/RFGLS-package.Rd
RFGLS/man/gls.batch.Rd
RFGLS/man/rescovmtx.Rd
RFGLS/man/gls.batch.get.Rd
RFGLS/man/FSV_frompedi.Rd
RFGLS/man/pedigree.Rd
RFGLS/man/fgls.Rd
RFGLS/man/geno.Rd