RGCCA: RGCCA and Sparse GCCA for multi-block data analysis

Multi-block data analysis concerns the analysis of several sets of variables (blocks) observed on the same group of individuals. The main aims of the RGCCA package are: (i) to study the relationships between blocks and (ii) to identify subsets of variables of each block which are active in their relationships with the other blocks.

Author
Arthur Tenenhaus and Vincent Guillemot
Date of publication
2013-07-24 18:50:19
Maintainer
Arthur Tenenhaus <arthur.tenenhaus@supelec.fr>
License
GPL (>= 2)
Version
2.0

View on CRAN

Man pages

BinarySearch
Internal function which does not have to be used by the users
cov2
Variance and Covariance (Matrices)
defl.select
deflation function
miscrossprod
Cross product function for inputs with missing data.
rgcca
Regularized Generalized Canonical Correlation Analysis...
rgccak
Internal function for computing the RGCCA parameters (RGCCA...
Russett
Russett data
scale2
Scaling and Centering of Matrix-like Objects
sgcca
Variable Selection For Generalized Canonical Correlation...
sgccak
Internal function for computing the SGCCA parameters (SGCCA...
soft
the function soft() encodes the soft-thresholding operator
soft.threshold
The function soft.threshold() soft-thresholds a vector such...
tau.estimate
Optimal shrinkage intensity parameters.

Files in this package

RGCCA
RGCCA/NAMESPACE
RGCCA/data
RGCCA/data/datalist
RGCCA/data/Russett.RData
RGCCA/R
RGCCA/R/defl.select.R
RGCCA/R/norm2.R
RGCCA/R/deflation.R
RGCCA/R/soft.R
RGCCA/R/soft.threshold.R
RGCCA/R/cov2.R
RGCCA/R/sgccak.R
RGCCA/R/tau.estimate.R
RGCCA/R/miscrossprod.R
RGCCA/R/initsvd.R
RGCCA/R/rgccak.R
RGCCA/R/BinarySearch.R
RGCCA/R/sgcca.R
RGCCA/R/scale2.R
RGCCA/R/rgcca.R
RGCCA/MD5
RGCCA/DESCRIPTION
RGCCA/man
RGCCA/man/scale2.Rd
RGCCA/man/soft.threshold.Rd
RGCCA/man/cov2.Rd
RGCCA/man/rgcca.Rd
RGCCA/man/miscrossprod.Rd
RGCCA/man/rgccak.Rd
RGCCA/man/tau.estimate.Rd
RGCCA/man/soft.Rd
RGCCA/man/sgccak.Rd
RGCCA/man/BinarySearch.Rd
RGCCA/man/defl.select.Rd
RGCCA/man/Russett.Rd
RGCCA/man/sgcca.Rd