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An implementation of the use of efficient score statistics in genomewide SNP set analysis with complex traits. Three standard score statistics (Cox, binomial, and Gaussian) are provided, but the package is easily extensible to include others. Code implementing the inferential procedure is primarily written in C++ and utilizes parallelization of the analysis to reduce runtime. A supporting function offers simple computation of observed, permutation, and FWER and FDR adjusted pvalues.
Package details 


Author  Chanhee Yi, Alexander Sibley, and Kouros Owzar 
Date of publication  20171214 19:55:23 UTC 
Maintainer  Alexander Sibley <[email protected]> 
License  GPL3 
Version  0.5.3 
Package repository  View on CRAN 
Installation 
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