RareComb: Combinatorial and Statistical Analyses of Rare Events

A custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). Version 1.1 includes a minor adjustment to the number of combinations to be considered for multiple testing correction. This updated version is more conservative in its approach and hence more selective. <doi:10.1101/2021.10.01.462832>.

Getting started

Package details

AuthorVijay Kumar Pounraja [aut, cre] (<https://orcid.org/0000-0002-9710-189X>)
MaintainerVijay Kumar Pounraja <vijaykumar.mp@gmail.com>
LicenseMIT + file LICENSE
Version1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("RareComb")

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RareComb documentation built on March 18, 2022, 7:02 p.m.