Rarity: Calculation of Rarity Indices for Species and Assemblages of Species
Version 1.3-6

Allows calculation of rarity weights for species and indices of rarity for assemblages of species according to different methods (Leroy et al. 2012, Insect. Conserv. Divers. 5:159-168 ; Leroy et al. 2013, Divers. Distrib. 19:794-803 ).

Browse man pages Browse package API and functions Browse package files

AuthorBoris Leroy
Date of publication2016-12-23 17:50:34
MaintainerBoris Leroy <leroy.boris@gmail.com>
LicenseGPL (>= 2.0)
Version1.3-6
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("Rarity")

Man pages

corPlot: Correlation plots
Irr: Index of Relative Rarity
Isr: Index of Summed Rarity
Rarity-package: A package to calculate rarity indices for species and...
rWeights: Calculation of rarity weights at a single or at multiple...
spid.occ: Occurrences of spiders of Western France at two different...

Functions

Irr Man page
Irr,data.frame,data.frame-method Man page
Irr,data.frame,matrix-method Man page
Irr,data.frame,vector-method Man page
Irr,matrix,data.frame-method Man page
Irr,matrix,matrix-method Man page
Irr,matrix,vector-method Man page
Irr,vector,data.frame-method Man page
Irr,vector,matrix-method Man page
Irr,vector,vector-method Man page
Isr Man page
Isr,data.frame,data.frame-method Man page
Isr,data.frame,matrix-method Man page
Isr,data.frame,vector-method Man page
Isr,matrix,data.frame-method Man page
Isr,matrix,matrix-method Man page
Isr,matrix,vector-method Man page
Isr,vector,data.frame-method Man page
Isr,vector,matrix-method Man page
Isr,vector,vector-method Man page
Rarity Man page
Rarity-package Man page
W Source code
corPlot Man page Source code
nFind Source code
rWeights Man page
rWeights,data.frame-method Man page
rWeights,matrix-method Man page
rWeights,vector-method Man page
rWeights-method Man page
rankings Source code
rr Source code
spid.occ Man page
sr Source code

Files

tests
tests/Irr_test.R
tests/Isr_test.R
tests/rWeights_tests.R
NAMESPACE
data
data/spid.occ.rda
R
R/correlation_plots.R
R/rarity_weights.R
R/relative_rarity.R
R/summed_rarity.R
R/Rarity.R
MD5
DESCRIPTION
man
man/Rarity-package.Rd
man/Isr.Rd
man/corPlot.Rd
man/rWeights.Rd
man/spid.occ.Rd
man/Irr.Rd
Rarity documentation built on May 20, 2017, 5:51 a.m.