RcmdrPlugin.KMggplot2: An Rcmdr Plug-in for Kaplan-Meier Plots and Other Plots by Using the ggplot2 Package

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A GUI front-end for ggplot2 allows Kaplan-Meier plot, histogram, Q-Q plot, box plot, errorbar plot, scatter plot, line chart, pie chart, bar chart, contour plot, and distribution plot.

Author
Triad sou. and Kengo NAGASHIMA
Date of publication
2015-12-30 17:43:48
Maintainer
Triad sou. <triadsou@gmail.com>
License
GPL-2
Version
0.2-3

View on CRAN

Man pages

data-dataContour
A Dummy Data for Contour Plots
data-dataKm
A Dummy Data for Survival Analysis
data-dataLine
A Dummy Data for Line Charts
geom_stepribbon
Step ribbon plots.
guiparts-checkboxes
Check Boxes Subclass
guiparts-checkboxes-front
The 'front' Method for 'checkboxes' Subclass
guiparts-gparts_base
Base Class for GUI Frames
guiparts-gparts_base-back
The 'back' Method for 'gparts_base' Class
guiparts-radioboxes
Radio Boxes Subclass
guiparts-radioboxes-front
The 'front' Method for 'radioboxes' Subclass
guiparts-textfield
Text Field Subclass
guiparts-textfield-front
The 'front' Method for 'textfield' Subclass
guiparts-textfields
Multiple Text Fields Subclass
guiparts-textfields-front
The 'front' Method for 'textfields' Subclass
guiparts-toolbox
Tool Box Subclass
guiparts-toolbox-front
The 'front' Method for 'toolbox' Subclass
guiparts-variableboxes
Variable Boxes Subclass
guiparts-variableboxes-front
The 'front' Method for 'variableboxes' Subclass
package-RcmdrPlugin.KMggplot2
Rcmdr Plug-In for Kaplan-Meier Plot and Other Plots by Using...
plot-factorize
Factorize Subclass
plot-factorize-windowFactorize
Wrapper Function of Factorize Subclass
plot-gbox
Box Plot Subclass
plot-gbox-windowBox
Wrapper Function of Box Plot Subclass
plot-gcont
Contour Plot Subclass
plot-gcont-windowContour
Wrapper Function of Contour Plot Subclass
plot-gdiscbar
Discrete Bar Charts Subclass
plot-gdiscbar-windowDiscretebar
Wrapper Function of Discrete Bar Charts Subclass
plot-gdist
Distribution Plot Subclass
plot-gdist-windowDistBeta
Wrapper Function of Beta Distribution Plot Subclass
plot-gdist-windowDistBinom
Wrapper Function of Binomial Distribution Plot Subclass
plot-gdist-windowDistCauchy
Wrapper Function of Cauchy Distribution Plot Subclass
plot-gdist-windowDistChisq
Wrapper Function of Chi-square Distribution Plot Subclass
plot-gdist-windowDistExp
Wrapper Function of Exponential Distribution Plot Subclass
plot-gdist-windowDistF
Wrapper Function of F Distribution Plot Subclass
plot-gdist-windowDistGamma
Wrapper Function of Gamma Distribution Plot Subclass
plot-gdist-windowDistGeom
Wrapper Function of Geometric Distribution Plot Subclass
plot-gdist-windowDistHyper
Wrapper Function of Hypergeometric Distribution Plot Subclass
plot-gdist-windowDistLnorm
Wrapper Function of Log-normal Distribution Plot Subclass
plot-gdist-windowDistLogis
Wrapper Function of Logistic Distribution Plot Subclass
plot-gdist-windowDistNbinom
Wrapper Function of Negative Binomial Distribution Plot...
plot-gdist-windowDistNorm
Wrapper Function of Normal Distribution Plot Subclass
plot-gdist-windowDistPois
Wrapper Function of Poisson Distribution Plot Subclass
plot-gdist-windowDistT
Wrapper Function of t Distribution Plot Subclass
plot-gdist-windowDistUnif
Wrapper Function of Uniform Distribution Plot Subclass
plot-gdist-windowDistWeibull
Wrapper Function of Weibull Distribution Plot Subclass
plot-ghist
Histogram Subclass
plot-ghist-windowHist
Wrapper Function of Histogram Subclass
plot-gkm
Kaplan-Meier Plot Subclass
plot-gkm-windowKM
Wrapper Function of Kaplan-Meier Plot Subclass
plot-gline
Line Chart Subclass
plot-gline-windowLine
Wrapper Function of Line Chart Subclass
plot-gpie
Pie Charts Subclass
plot-gpie-windowPie
Wrapper Function of Pie Charts Subclass
plot-gqq
Q-Q Plot Subclass
plot-gqq-windowQQ
Wrapper Function of Q-Q Plot Subclass
plot-gscat
Scatter Plot Subclass
plot-gscatmat
Scatter Plot Matrix Subclass
plot-gscatmat-windowScattermat
Wrapper Function of Scatter Plot Matrix Subclass
plot-gscat-windowScatter
Wrapper Function of Scatter Plot Subclass
plot-plot_base
Base Class for Plot Windows
plot-plot_base-checkError
Check Errors
plot-plot_base-checkTheme
Check Themes
plot-plot_base-checkVariable
Check Variable Length
plot-plot_base-commandDoIt
An Wrapper Function for Command Execution
plot-plot_base-getCoord
Get 'coord'
plot-plot_base-getFacet
Get 'facet'
plot-plot_base-getGeom
Get 'geom'
plot-plot_base-getGgplot
Get 'ggplot'
plot-plot_base-getHelp
Get Help
plot-plot_base-getMain
Get Main Label
plot-plot_base-getMessage
Get Plot Error Message
plot-plot_base-getOpts
Get Other 'opts'
plot-plot_base-getParms
Get Graphics Parameters
plot-plot_base-getPlot
Get Plot
plot-plot_base-getScale
Get 'scale'
plot-plot_base-getTheme
Get 'theme'
plot-plot_base-getWindowTitle
Get Title
plot-plot_base-getXlab
Get 'xlab'
plot-plot_base-getYlab
Get 'ylab'
plot-plot_base-getZlab
Get 'zlab'
plot-plot_base-plotWindow
Create Plot Window
plot-plot_base-registRmlist
Register Deletable Temporary Objects
plot-plot_base-removeRmlist
Remove Registered Temporary Objects
plot-plot_base-savePlot
Save Plot
plot-plot_base-setBack
Set Back Parts
plot-plot_base-setDataframe
Set Data Frames
plot-plot_base-setFront
Set Front Parts
theme-natrisk
A Theme for No of At Risk in Kaplan-Meier Plots
theme-natrisk21
A Theme for No of At Risk in Kaplan-Meier Plots
theme-natriskbg
A Theme for No of At Risk in Kaplan-Meier Plots
theme-simple
A Simple Black and White Theme
theme-wsj2
A Wrapper Theme for ggthemes's theme_wsj
util-gettextKmg2
A 'gettextRcmdr' Wrapper Function
util-ggsaveKmg2
A Modified Function of 'ggsave' for 'recordedplot' Class...
util-nonFactors
Select Non Factor Variables
util-nonFactorsP
Check Non Factor Variables in The Active Dataset

Files in this package

RcmdrPlugin.KMggplot2
RcmdrPlugin.KMggplot2/po
RcmdrPlugin.KMggplot2/po/R-RcmdrPlugin.KMggplot2-sl.po
RcmdrPlugin.KMggplot2/po/R-RcmdrPlugin.KMggplot2-ja.po
RcmdrPlugin.KMggplot2/po/R-RcmdrPlugin.KMggplot2.pot
RcmdrPlugin.KMggplot2/inst
RcmdrPlugin.KMggplot2/inst/po
RcmdrPlugin.KMggplot2/inst/po/ja
RcmdrPlugin.KMggplot2/inst/po/ja/LC_MESSAGES
RcmdrPlugin.KMggplot2/inst/po/ja/LC_MESSAGES/R-RcmdrPlugin.KMggplot2.mo
RcmdrPlugin.KMggplot2/inst/po/sl
RcmdrPlugin.KMggplot2/inst/po/sl/LC_MESSAGES
RcmdrPlugin.KMggplot2/inst/po/sl/LC_MESSAGES/R-RcmdrPlugin.KMggplot2.mo
RcmdrPlugin.KMggplot2/inst/doc
RcmdrPlugin.KMggplot2/inst/doc/extrafont.html
RcmdrPlugin.KMggplot2/inst/doc/extrafont.Rmd
RcmdrPlugin.KMggplot2/inst/doc/geom-stepribbon.R
RcmdrPlugin.KMggplot2/inst/doc/geom-stepribbon.html
RcmdrPlugin.KMggplot2/inst/doc/geom-stepribbon.Rmd
RcmdrPlugin.KMggplot2/inst/doc/plot-km-requirement.Rmd
RcmdrPlugin.KMggplot2/inst/doc/plot-km-requirement.html
RcmdrPlugin.KMggplot2/inst/doc/plot-km-requirement.R
RcmdrPlugin.KMggplot2/inst/etc
RcmdrPlugin.KMggplot2/inst/etc/menus.txt
RcmdrPlugin.KMggplot2/inst/etc/tmenus.txt
RcmdrPlugin.KMggplot2/NAMESPACE
RcmdrPlugin.KMggplot2/NEWS
RcmdrPlugin.KMggplot2/NEWS.md
RcmdrPlugin.KMggplot2/data
RcmdrPlugin.KMggplot2/data/dataLine.RData
RcmdrPlugin.KMggplot2/data/dataContour.RData
RcmdrPlugin.KMggplot2/data/dataKm.RData
RcmdrPlugin.KMggplot2/R
RcmdrPlugin.KMggplot2/R/plot-gpie.r
RcmdrPlugin.KMggplot2/R/theme-natrisk.r
RcmdrPlugin.KMggplot2/R/plot-ghist.r
RcmdrPlugin.KMggplot2/R/util-gettextKmg2.r
RcmdrPlugin.KMggplot2/R/theme-natriskbg.r
RcmdrPlugin.KMggplot2/R/plot-gkm.r
RcmdrPlugin.KMggplot2/R/guiparts-aaa.r
RcmdrPlugin.KMggplot2/R/guiparts-textfield.r
RcmdrPlugin.KMggplot2/R/guiparts-checkboxes.r
RcmdrPlugin.KMggplot2/R/aaa-package.r
RcmdrPlugin.KMggplot2/R/guiparts-textfields.r
RcmdrPlugin.KMggplot2/R/plot-gline.r
RcmdrPlugin.KMggplot2/R/plot-factorise.r
RcmdrPlugin.KMggplot2/R/util-nonFactors.r
RcmdrPlugin.KMggplot2/R/plot-gbox.r
RcmdrPlugin.KMggplot2/R/theme-wsj2.r
RcmdrPlugin.KMggplot2/R/plot-gqq.r
RcmdrPlugin.KMggplot2/R/data-aaa.r
RcmdrPlugin.KMggplot2/R/plot-gdiscbar.r
RcmdrPlugin.KMggplot2/R/geom-stepribbon.r
RcmdrPlugin.KMggplot2/R/plot-gcont.r
RcmdrPlugin.KMggplot2/R/guiparts-radioboxes.r
RcmdrPlugin.KMggplot2/R/guiparts-toolbox.r
RcmdrPlugin.KMggplot2/R/plot-gdist.r
RcmdrPlugin.KMggplot2/R/zzz.r
RcmdrPlugin.KMggplot2/R/util-ggsaveKmg2.r
RcmdrPlugin.KMggplot2/R/guiparts-variableboxes.r
RcmdrPlugin.KMggplot2/R/plot-gscatmat.r
RcmdrPlugin.KMggplot2/R/plot-aaa.r
RcmdrPlugin.KMggplot2/R/theme-simple.r
RcmdrPlugin.KMggplot2/R/theme-natrisk21.r
RcmdrPlugin.KMggplot2/R/plot-gscat.r
RcmdrPlugin.KMggplot2/vignettes
RcmdrPlugin.KMggplot2/vignettes/extrafont.Rmd
RcmdrPlugin.KMggplot2/vignettes/geom-stepribbon.Rmd
RcmdrPlugin.KMggplot2/vignettes/plot-km-requirement.Rmd
RcmdrPlugin.KMggplot2/README.md
RcmdrPlugin.KMggplot2/MD5
RcmdrPlugin.KMggplot2/build
RcmdrPlugin.KMggplot2/build/vignette.rds
RcmdrPlugin.KMggplot2/build/partial.rdb
RcmdrPlugin.KMggplot2/DESCRIPTION
RcmdrPlugin.KMggplot2/man
RcmdrPlugin.KMggplot2/man/plot-plot_base-getGgplot.Rd
RcmdrPlugin.KMggplot2/man/plot-ghist.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistGeom.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-commandDoIt.Rd
RcmdrPlugin.KMggplot2/man/plot-gkm.Rd
RcmdrPlugin.KMggplot2/man/theme-natrisk.Rd
RcmdrPlugin.KMggplot2/man/plot-gcont-windowContour.Rd
RcmdrPlugin.KMggplot2/man/plot-gdiscbar-windowDiscretebar.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base.Rd
RcmdrPlugin.KMggplot2/man/plot-gpie.Rd
RcmdrPlugin.KMggplot2/man/plot-gdiscbar.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistBeta.Rd
RcmdrPlugin.KMggplot2/man/plot-gline.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getTheme.Rd
RcmdrPlugin.KMggplot2/man/guiparts-gparts_base.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-checkError.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist.Rd
RcmdrPlugin.KMggplot2/man/plot-gqq.Rd
RcmdrPlugin.KMggplot2/man/data-dataContour.Rd
RcmdrPlugin.KMggplot2/man/guiparts-variableboxes.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-setDataframe.Rd
RcmdrPlugin.KMggplot2/man/util-nonFactorsP.Rd
RcmdrPlugin.KMggplot2/man/plot-factorize.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistNbinom.Rd
RcmdrPlugin.KMggplot2/man/plot-gline-windowLine.Rd
RcmdrPlugin.KMggplot2/man/plot-ghist-windowHist.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getCoord.Rd
RcmdrPlugin.KMggplot2/man/guiparts-radioboxes.Rd
RcmdrPlugin.KMggplot2/man/plot-factorize-windowFactorize.Rd
RcmdrPlugin.KMggplot2/man/guiparts-textfields.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getParms.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistPois.Rd
RcmdrPlugin.KMggplot2/man/plot-gbox.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getGeom.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getMessage.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistChisq.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-removeRmlist.Rd
RcmdrPlugin.KMggplot2/man/guiparts-textfield.Rd
RcmdrPlugin.KMggplot2/man/guiparts-checkboxes-front.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getScale.Rd
RcmdrPlugin.KMggplot2/man/plot-gpie-windowPie.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistCauchy.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getYlab.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getWindowTitle.Rd
RcmdrPlugin.KMggplot2/man/plot-gscat.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-checkTheme.Rd
RcmdrPlugin.KMggplot2/man/package-RcmdrPlugin.KMggplot2.Rd
RcmdrPlugin.KMggplot2/man/theme-wsj2.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getOpts.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-savePlot.Rd
RcmdrPlugin.KMggplot2/man/data-dataLine.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistLogis.Rd
RcmdrPlugin.KMggplot2/man/guiparts-checkboxes.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistUnif.Rd
RcmdrPlugin.KMggplot2/man/guiparts-textfields-front.Rd
RcmdrPlugin.KMggplot2/man/plot-gkm-windowKM.Rd
RcmdrPlugin.KMggplot2/man/util-nonFactors.Rd
RcmdrPlugin.KMggplot2/man/data-dataKm.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getZlab.Rd
RcmdrPlugin.KMggplot2/man/plot-gscat-windowScatter.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getXlab.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistExp.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistHyper.Rd
RcmdrPlugin.KMggplot2/man/theme-natrisk21.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-setFront.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getMain.Rd
RcmdrPlugin.KMggplot2/man/theme-natriskbg.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistLnorm.Rd
RcmdrPlugin.KMggplot2/man/guiparts-variableboxes-front.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-registRmlist.Rd
RcmdrPlugin.KMggplot2/man/guiparts-radioboxes-front.Rd
RcmdrPlugin.KMggplot2/man/geom_stepribbon.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistNorm.Rd
RcmdrPlugin.KMggplot2/man/plot-gscatmat.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistT.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getFacet.Rd
RcmdrPlugin.KMggplot2/man/util-gettextKmg2.Rd
RcmdrPlugin.KMggplot2/man/util-ggsaveKmg2.Rd
RcmdrPlugin.KMggplot2/man/plot-gcont.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getHelp.Rd
RcmdrPlugin.KMggplot2/man/theme-simple.Rd
RcmdrPlugin.KMggplot2/man/guiparts-gparts_base-back.Rd
RcmdrPlugin.KMggplot2/man/plot-gbox-windowBox.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-setBack.Rd
RcmdrPlugin.KMggplot2/man/guiparts-textfield-front.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-plotWindow.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistBinom.Rd
RcmdrPlugin.KMggplot2/man/plot-gqq-windowQQ.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-checkVariable.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistWeibull.Rd
RcmdrPlugin.KMggplot2/man/plot-plot_base-getPlot.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistGamma.Rd
RcmdrPlugin.KMggplot2/man/plot-gdist-windowDistF.Rd
RcmdrPlugin.KMggplot2/man/guiparts-toolbox-front.Rd
RcmdrPlugin.KMggplot2/man/plot-gscatmat-windowScattermat.Rd
RcmdrPlugin.KMggplot2/man/guiparts-toolbox.Rd