get.rescaled: Rescaling a clonal tracking dataset
In RestoreNet: Random-Effects Stochastic Reaction Networks
get.rescaled R Documentation
Rescaling a clonal tracking dataset
Description
Rescales a clonal tracking dataset based on the sequencing depth.
Usage
get.rescaled(Y)
Arguments
Y
A 3-dimensional array whose dimensions are the time, the cell type and the clone respectively.
Details
This function rescales a clonal tracking dataset Y according to the formula
Y_{ijk} \leftarrow Y_{ijk} \cdot \frac{min_{ij}\sum_cY_{ijc}}{\sum_cY_{ijc}}
Value
A rescaled clonal tracking dataset.
Examples
get.rescaled(Y_RM[["ZH33"]])
RestoreNet documentation built on May 29, 2024, 4 a.m.
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| get.rescaled | R Documentation |
Rescaling a clonal tracking dataset
Description
Rescales a clonal tracking dataset based on the sequencing depth.
Usage
get.rescaled(Y)
Arguments
Y |
A 3-dimensional array whose dimensions are the time, the cell type and the clone respectively. |
Details
This function rescales a clonal tracking dataset Y according to the formula
Y_{ijk} \leftarrow Y_{ijk} \cdot \frac{min_{ij}\sum_cY_{ijc}}{\sum_cY_{ijc}}
Value
A rescaled clonal tracking dataset.
Examples
get.rescaled(Y_RM[["ZH33"]])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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