RnavGraph: Using Graphs as a Navigational Infrastructure

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GUI to explore high dimensional data (including image data) using graphs as navigational infrastructure.

Author
Adrian R. Waddell and R. Wayne Oldford
Date of publication
2014-12-18 15:50:43
Maintainer
Adrian Waddell <adrian@waddell.ch>
License
GPL-2
Version
0.1.8
URLs

View on CRAN

Man pages

closeViz
Method that gets called when switching away from a graph that...
closeViz-methods
Initialization of a new Display
completegraph
Create a complete graph of class graphAM
initializeViz
Method that gets called for initializing a display for some...
initializeViz-methods
Initialization of a new Display
linegraph
Linegraph of a graph
linegraph-methods
Linegraph of a graph
names_--methods
Change the names of a NG_data object
names-methods
Show the variable names of a NG_data object
navGraph
Start an navGraph session
newgraph
Create a graph object of class graph
ng_2d
Visualization instruction for 2d scatterplots on a tk2d...
ng_2d_myplot
Visualization instruction for 2d scatterplots on a user...
ng_data
Create an NG_data object to be used by a navGraph session
ng_get
Extract data from a NG_data, NG_graph, NG_path or navgraph...
ng_get_color
Extract point coloring from an active navGraph session for a...
ng_get-methods
Access data from a NG_... object
ng_get_size
Extract point sizes from an active navGraph session for a...
ng_graph
Create an NG_data object to be used by a navGraph session
ng_image_array_gray
Convert a matrix or data.frame of image data into a NG_image...
ng_image_files
Import color image files (png, jpg, bmp, etc...) into a...
ng_set
Shows which data can be modified in a NG_data, NG_graph,...
ng_set_color_--methods
Change colors of data points in an active navGraph session
ng_set_colorsetter
Change colors of data points in an active navGraph session
ng_set_--methods
~~ Methods for Function ng_set<- ~~
ng_set-methods
Change data in NG_... objects
ng_setsetter
Modify data in a NG_data, NG_graph, NG_path or navgraph...
ng_set_size_--methods
Change sizes of data points in an active navGraph session
ng_set_sizesetter
Change sizes of data points in an active navGraph session
ng_update
Synchronize a navGraph handler with a running navGraph sesson
NG_Visualization-class
Class '"NG_Visualization"'
ng_walk
Walk a path on the current graph in a navGraph session
olive
Fatty Acid Composition of Italian Olive Oils
plot-methods
Plot the graph saved in a NG_data object.
RnavGraph-package
Overview RnavGraph package
scagEdgeWeights
Create a from-to edge matrix with the scagnostic weights
scagGraph
Create a list of graphs, given the scagnostics edge weights
scagNav
Start a navGraph session and filter the navigation graph's...
shortnames
Returns the shortnames of a NG_data object.
shortnames_--methods
Change the shortnames of a NG_data object
shortnames-methods
Show the shortnames of a NG_data object
shortnamessetter
Modify the shortnames of a NG_data object.
updateViz
Method that gets called when bullet state is changed on a...
updateViz-methods
Initialization of a new Display

Files in this package

RnavGraph
RnavGraph/inst
RnavGraph/inst/tcl
RnavGraph/inst/tcl/tkScatterplotV3.tcl
RnavGraph/inst/tcl/GraphDisplay.tcl
RnavGraph/inst/tcl/tkScatterplotV1.tcl
RnavGraph/inst/doc
RnavGraph/inst/doc/RnavGraph.pdf
RnavGraph/inst/doc/RnavGraph.R
RnavGraph/inst/doc/RnavGraph.Rnw
RnavGraph/src
RnavGraph/src/Makevars
RnavGraph/src/image_scale.c
RnavGraph/src/display_stuff.c
RnavGraph/NAMESPACE
RnavGraph/demo
RnavGraph/demo/ng_2d_images_iris.R
RnavGraph/demo/ng_2d_image_files_aloi.R
RnavGraph/demo/ng_2d_olive.R
RnavGraph/demo/ng_2d_iris.R
RnavGraph/demo/ng_2d_myplot_base.R
RnavGraph/demo/ng_2d_myplot_grid.R
RnavGraph/demo/ng_2d_images_digits.R
RnavGraph/demo/ng_2d_myplot_hexbin.R
RnavGraph/demo/00Index
RnavGraph/demo/ng_2d_myplot_rgl.R
RnavGraph/demo/ng_2d_images_faces.R
RnavGraph/demo/ng_2d_images_alpha_letter.R
RnavGraph/demo/ng_2d_images_frey_LLE.R
RnavGraph/demo/ng_2d_images_frey_isomap.R
RnavGraph/demo/ng_own_viz.R
RnavGraph/demo/ng_2d_scagnostics_olive.R
RnavGraph/NEWS
RnavGraph/data
RnavGraph/data/olive.rda
RnavGraph/R
RnavGraph/R/AllGenerics.R
RnavGraph/R/SettingClasses.R
RnavGraph/R/graphtools.R
RnavGraph/R/Visualization.R
RnavGraph/R/Viz2D_tk2d.R
RnavGraph/R/Visualization2D.R
RnavGraph/R/ng_path.R
RnavGraph/R/FunctionNavGraph.R
RnavGraph/R/NavGraphHandler.R
RnavGraph/R/Viz2D_Axis.R
RnavGraph/R/ng_graph.R
RnavGraph/R/scagNav.R
RnavGraph/R/GraphDisplay.R
RnavGraph/R/navGraph.R
RnavGraph/R/ng_image.R
RnavGraph/R/zzz.R
RnavGraph/R/ng_data.R
RnavGraph/vignettes
RnavGraph/vignettes/tikz_edgeSelect.tex
RnavGraph/vignettes/products.tex
RnavGraph/vignettes/tikz_animation.tex
RnavGraph/vignettes/rep_p_GLG.tex
RnavGraph/vignettes/img
RnavGraph/vignettes/img/tk2dimages1.png
RnavGraph/vignettes/img/m4_2.png
RnavGraph/vignettes/img/f2_1.png
RnavGraph/vignettes/img/m4_1.png
RnavGraph/vignettes/img/tk2dImagesObject.png
RnavGraph/vignettes/img/f1_2.png
RnavGraph/vignettes/img/graph.png
RnavGraph/vignettes/img/f2_2.png
RnavGraph/vignettes/img/m2_1.png
RnavGraph/vignettes/img/m1_1.png
RnavGraph/vignettes/img/settings.png
RnavGraph/vignettes/img/Iris2D.png
RnavGraph/vignettes/img/m1_2.png
RnavGraph/vignettes/img/m3_1.png
RnavGraph/vignettes/img/tk2dGlyphs.png
RnavGraph/vignettes/img/imageDigits.png
RnavGraph/vignettes/img/aloi.jpg
RnavGraph/vignettes/img/f1_1.png
RnavGraph/vignettes/img/tk2dcolors.png
RnavGraph/vignettes/img/all.png
RnavGraph/vignettes/img/Iris3Dgraph.png
RnavGraph/vignettes/img/tk2dcolors2.png
RnavGraph/vignettes/tikz_tk2d_main.tex
RnavGraph/vignettes/tikz_drag.tex
RnavGraph/vignettes/tikz_walk.tex
RnavGraph/vignettes/temp.tex
RnavGraph/vignettes/RnavGraph.Rnw
RnavGraph/vignettes/tikz_modifyGraph.tex
RnavGraph/vignettes/lg.tex
RnavGraph/vignettes/p_prod.tex
RnavGraph/MD5
RnavGraph/build
RnavGraph/build/vignette.rds
RnavGraph/DESCRIPTION
RnavGraph/man
RnavGraph/man/ng_data.Rd
RnavGraph/man/ng_setsetter.Rd
RnavGraph/man/plot-methods.Rd
RnavGraph/man/names_--methods.Rd
RnavGraph/man/closeViz.Rd
RnavGraph/man/ng_update.Rd
RnavGraph/man/shortnames-methods.Rd
RnavGraph/man/updateViz-methods.Rd
RnavGraph/man/olive.Rd
RnavGraph/man/closeViz-methods.Rd
RnavGraph/man/ng_set_size_--methods.Rd
RnavGraph/man/completegraph.Rd
RnavGraph/man/initializeViz-methods.Rd
RnavGraph/man/navGraph.Rd
RnavGraph/man/names-methods.Rd
RnavGraph/man/newgraph.Rd
RnavGraph/man/ng_2d_myplot.Rd
RnavGraph/man/ng_walk.Rd
RnavGraph/man/linegraph.Rd
RnavGraph/man/scagNav.Rd
RnavGraph/man/shortnamessetter.Rd
RnavGraph/man/ng_set-methods.Rd
RnavGraph/man/ng_graph.Rd
RnavGraph/man/NG_Visualization-class.Rd
RnavGraph/man/scagGraph.Rd
RnavGraph/man/ng_image_files.Rd
RnavGraph/man/ng_2d.Rd
RnavGraph/man/initializeViz.Rd
RnavGraph/man/ng_set_sizesetter.Rd
RnavGraph/man/ng_set.Rd
RnavGraph/man/RnavGraph-package.Rd
RnavGraph/man/ng_image_array_gray.Rd
RnavGraph/man/ng_set_colorsetter.Rd
RnavGraph/man/shortnames.Rd
RnavGraph/man/ng_get.Rd
RnavGraph/man/ng_set_--methods.Rd
RnavGraph/man/ng_get_color.Rd
RnavGraph/man/ng_set_color_--methods.Rd
RnavGraph/man/ng_get_size.Rd
RnavGraph/man/shortnames_--methods.Rd
RnavGraph/man/ng_get-methods.Rd
RnavGraph/man/linegraph-methods.Rd
RnavGraph/man/scagEdgeWeights.Rd
RnavGraph/man/updateViz.Rd