check_haul_species_TCTB: Check species of TC in TB

In RoME: Multiple Checks on MEDITS Trawl Survey Data

Check species of TC in TB

Description

The function checks whether all the species present in TC (biological data table) must be listed in TB (catch data table)

Usage

check_haul_species_TCTB(DataTB, DataTC, year, wd, suffix)

Arguments

DataTB	catch data table according to MEDITS protocol (TB)
DataTC	Biological data table according to MEDITS protocol (TC)
year	reference year for the analysis
wd	working directory path defined by the user
suffix	Suffix string of the Logfile

Details

The function returns a warning message in the logfile.

Value

If a species present in the TC table (biological data table) is not reported in the TB (catch data table) an error message is reported in the logfile and a "Critical_errors" file is saved in the working directory reporting details on the errors.

Author(s)

I. Bitetto, W. Zupa

References

Anonymus. 2017. MEDITS-Handbook. Version n. 9. MEDITS Working Group. 106 pp.https://www.sibm.it/MEDITS%202011/principaledownload.htm

Examples

wd <- tempdir()
suffix="2020-03-05_time_h17m44s55"
year=2008
check_haul_species_TCTB(RoME::TB, RoME::TC, year, wd, suffix)

RoME documentation built on April 24, 2026, 1:07 a.m.