plot.troppca: Plot the Tropical Principal Components with Data Projections
In Rtropical: Data Analysis Tools over Space of Phylogenetic Trees Using Tropical Geometry
Description
Usage
Arguments
Value
Description
Visualize the second order tropical principle components in troppca
as a tropical triangle with projections on a two-dimensional plot via tropical isometry.
Usage
1
2
Arguments
x
a fitted troppca object.
plab
a vector of labels of all points in the given data matrix.
Not needed for unlabeled data. (default: NULL)
fw
a logical variable to determine if to add
Fermat-Weber point of the data projection. (default: FALSE)
...
Not used. Other arguments to plot
Value
plot.troppca does not return anything other than the plot.
Rtropical documentation built on Nov. 10, 2021, 1:07 a.m.
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Description Usage Arguments Value
Description
Visualize the second order tropical principle components in troppca
as a tropical triangle with projections on a two-dimensional plot via tropical isometry.
Usage
1 2 |
Arguments
x |
a fitted |
plab |
a vector of labels of all points in the given data matrix. Not needed for unlabeled data. (default: NULL) |
fw |
a logical variable to determine if to add Fermat-Weber point of the data projection. (default: FALSE) |
... |
Not used. Other arguments to plot |
Value
plot.troppca does not return anything other than the plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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