convert_fa2sf: Converts different formats to represent multiple sample data
In SADISA: Species Abundance Distributions with Independent-Species Assumption
Description
Usage
Arguments
Value
References
Description
Converts the full abundance matrix into species frequencies
If S is the number of species and M is the number of samples, then fa is
the full abundance matrix of dimension S by M. The for example
fa = [0 1 0;3 2 1;0 1 0] leads to sf = [0 1 0 2;3 2 1 1];
Usage
1
convert_fa2sf(fa)
Arguments
fa
the full abundance matrix with species in rows and samples in columns
Value
the sample frequency matrix
References
Haegeman, B. & R.S. Etienne (2017). A general sampling formula for community structure data. Methods in Ecology & Evolution. In press.
SADISA documentation built on Oct. 30, 2019, 10:25 a.m.
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Description Usage Arguments Value References
Description
Converts the full abundance matrix into species frequencies If S is the number of species and M is the number of samples, then fa is the full abundance matrix of dimension S by M. The for example fa = [0 1 0;3 2 1;0 1 0] leads to sf = [0 1 0 2;3 2 1 1];
Usage
1 | convert_fa2sf(fa)
|
Arguments
fa |
the full abundance matrix with species in rows and samples in columns |
Value
the sample frequency matrix
References
Haegeman, B. & R.S. Etienne (2017). A general sampling formula for community structure data. Methods in Ecology & Evolution. In press.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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