SCINA: A Semi-Supervised Category Identification and Assignment Tool

An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category.

Getting started

Package details

AuthorZe Zhang
MaintainerZe Zhang <[email protected]>
Package repositoryView on CRAN
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SCINA documentation built on Oct. 13, 2018, 9:03 a.m.