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An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category. See Zhang Z, et al (2019) <doi:10.3390/genes10070531> for more details.
Package details |
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Author | Ze Zhang |
Maintainer | Ze Zhang <Ze.Zhang@utsouthwestern.edu> |
License | GPL-2 |
Version | 1.2.0 |
URL | http://lce.biohpc.swmed.edu/scina/ https://github.com/jcao89757/SCINA |
Package repository | View on CRAN |
Installation |
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