Man pages for SFSI
Sparse Family and Selection Index
| BinaryFiles | Save/read binary files |
| covariance_matrix | Conversion of a covariance matrix to a distance/correlation... |
| fitBLUP | Fitting a Linear Mixed model to calculate BLUP |
| get_folds | Data partition into folds of the same size |
| getGenCov | Pairwise Genetic Covariance |
| LARS | Least Angle Regression to solve LASSO-type problems |
| Methods_LASSO | LASSO methods |
| Methods_SGP | SGP methods |
| multitrait.plot | Accuracy vs penalization from multi-trait SGP |
| net | Graphical Network |
| path.plot | Coefficients path plot |
| plot.net | Plotting a network |
| plot.SGP | Accuracy vs penalization plot |
| prune | R-squared pruning |
| read_SGP | Read and combine SGP outputs |
| SGP | Sparse Genomic Prediction |
| solveEN | Coordinate Descent algorithm to solve Elastic-Net-type... |
| wheat | Wheat dataset |
