SIMPLICA: Biclustering via Simplivariate Component Analysis

Identifies constant, additive, multiplicative, and user-defined simplivariate components in numeric data matrices using a genetic algorithm. Supports flexible pattern definitions and provides visualization for general biclustering applications across diverse domains. The method builds on simplivariate models as introduced in Hageman et al. (2008) <doi:10.1371/journal.pone.0003259> and is related to biclustering frameworks as reviewed by Madeira and Oliveira (2004) <doi:10.1109/TCBB.2004.2>.

Getting started

Package details

AuthorJos Hageman [aut, cre]
MaintainerJos Hageman <jos.hageman@wur.nl>
LicenseGPL-3
Version1.0.0
URL https://github.com/joshageman/SIMPLICA
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("SIMPLICA")

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SIMPLICA documentation built on Sept. 11, 2025, 1:08 a.m.